Oncorhynchus nerka (sockeye salmon): 115108456
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Entry
115108456 CDS
T07952
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00280
Valine, leucine and isoleucine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
115108456
Enzymes [BR:
one01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
115108456
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BT_MCC_alpha
BSH_YknX
BSH_CusB
ATPgrasp_ST
RimK
ATP-grasp_3
ATP-grasp_LDMS
BSH_RND
ATP-grasp_4
BSH_CzcB
NQRA_N
Ntox43
RnfC_N
Motif
Other DBs
NCBI-GeneID:
115108456
NCBI-ProteinID:
XP_029488668
LinkDB
All DBs
Position
LG24:50321726..50330296
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AA seq
708 aa
AA seq
DB search
MASVLNVQTLQGLRIFQQKLIWTKGFVRFASIGQGRIEKVLIANRGEIACRVMRTAKKMG
VRSVAVYSDADRHSMHVAMADEAYNIGPAASQQSYLSMEKVMEVAKRSGSHAVHPGYGFL
SENTEFAEACKQEGIIFIGPPSSAIRDMGIKSTSKYIMSAAGVPIIEGYHGEDQSDEKLQ
AEAVRIGYPVMIKAVRGGGGKGMRIAHTAEDFHEQLESARREARKSFNDDVMLVEKFVED
PRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISKDVRRKLGEAAVRAAKA
VNYVGAGTVEFIMDAQHNFFFMEMNTRLQVEHPVSEMITGTDLVEWQLRVAAGERLPLLQ
EEIELMGHSFEARIYAEDPNNDFLPGAGPLLHLSIPLADECTRIETGVREGDEVSAHYDP
MIAKLVVWGEDRSAALRKLRYCLRQYNIVGLNTNIDFLLSLSGHPEFEAGNVTTSFIPQH
YEQLFPKPSPPSRATLCQAALGLLLRERASTRTFRDQSNDPFSPFASSNGRRVNILYSRN
MTLQLGETKVELTVTYNPDGTYSMEIGGEVFQVSGEVETEGQTSFLHCSVNGVKSRPKLV
ILDNTVHLFSMEGSAEVSIPVPKFLAGVSTGAQGGAVAPMTGTIEKVLVKAGDTVQMGDS
LMVMNAMKMEHIIRAPKAGVIKKVFFKDGSQANRHAALVEFEEAAEEE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtcctgaatgttcaaaccctacagggtttaagaatatttcaacagaaattg
atatggaccaaaggatttgtgcggtttgcctcaattgggcaaggcaggatagaaaaagtc
ctcattgccaacagaggagaaatcgcctgccgtgtgatgcgaacagcaaagaagatgggt
gtgcgctctgtggcagtatacagtgatgcagatcgtcattccatgcatgtggccatggca
gatgaggcctataacattgggccagccgcgtcccagcagagttacttgtccatggagaaa
gtcatggaggttgccaagagatctggatcgcatgctgtccacccaggatatggcttcctg
tcagagaacacagagtttgctgaggcatgcaaacaggagggtatcatctttattggccct
ccatcatctgctatcagagacatgggtatcaaaagtacatcaaaatacataatgtcagct
gcgggtgttcctatcatcgagggttaccacggagaggaccaatcggatgagaagctccaa
gctgaggctgtcaggataggctacccagtgatgataaaggctgtgcgtggcgggggtggt
aaaggaatgcgcattgcacacaccgctgaagacttccatgagcagcttgagtctgcgaga
cgagaggctcgcaagtccttcaatgatgatgtcatgctagtggagaaatttgtagaggac
cccagacatgtggaggtccaggtttttggggaccagcatggaaatgctgtctacctgttt
gagcgggattgcagcgtgcagagaaggcaccagaagatcattgaggaagcaccaggtcct
ggaattagcaaggacgtgaggcggaaactgggtgaggcagccgtgagagcagccaaagcc
gtcaactatgtgggagcaggcactgtggagttcatcatggatgcacagcacaacttcttc
ttcatggagatgaacacgcgtctgcaggtggagcaccctgtgtctgagatgatcactggt
actgacctggtggagtggcagctcagggtggctgcaggcgagaggctgcccctcctgcag
gaggagatagaactgatgggccattcgtttgaggccaggatatacgctgaggaccccaac
aacgacttcctccctggggcaggacccctccttcatctgtctatacccctggcagacgag
tgcacacgcatcgagacaggcgtcagggaaggagatgaagtgtcagcccactacgacccc
atgatcgctaaactggtggtgtggggagaggaccgctctgctgctctgaggaagctcaga
tactgcttacgtcagtacaacattgtaggcctcaacaccaatattgacttcctgctgagt
ctgtctggccacccagagtttgaggcagggaatgtgaccaccagcttcatcccccagcac
tatgagcagctgttccccaagcccagccctccctccagggcaacactgtgtcaggctgcc
ctgggcctgctgctcagagagagggccagcactcgaaccttcagagaccagtccaacgat
cccttctctccttttgcctccagtaacggcaggagggtgaacatcctatatagtaggaat
atgacgctccagctgggtgaaactaaagtggaattaacggttacatataatccagatggg
acctactctatggagattggaggggaagtgttccaggtgtcaggggaggtggagacagag
ggacagacatcattcctgcactgctctgtgaacggggtgaagtcccggcccaaactggtc
atcttggataacacagtacacctcttctctatggagggtagtgcggaggtgagcattcca
gtgcccaagttcctggctggtgtgagcacaggagcacagggaggagctgtggcacccatg
actgggaccattgagaaggtgctggtgaaggcaggagacacagtgcagatgggagactcc
ttgatggtgatgaatgccatgaaaatggagcacatcatccgagcacccaaagctggagtc
atcaagaaggtgtttttcaaggatggctcccaggccaaccgacacgcagccctggtagag
tttgaggaggccgctgaggaagaataa
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