Oncorhynchus nerka (sockeye salmon): 115108511
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Entry
115108511 CDS
T07952
Name
(RefSeq) F-box/LRR-repeat protein 5
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115108511
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115108511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
Hemerythrin
LRR_6
F-box
LRR_At1g61320_AtMIF1
LRR_At5g56370
LYRM_2
DUF6238
Motif
Other DBs
NCBI-GeneID:
115108511
NCBI-ProteinID:
XP_029488785
LinkDB
All DBs
Position
LG24:complement(52321554..52339412)
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AA seq
691 aa
AA seq
DB search
MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSQTNFSNNNDFRSFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCNVYNVHSDNKLSEMLSLFEKGLRSIKSENEQLNYAQQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDIKKQVIAQHSSQQRWNCAAEVLKGLSLWSQA
EELHKAFKYADHEKTDDELEKELCSAHISQLPTEVLLCLFRYLGPEDLCHCGQVCSAWSD
LAKTGSLWRHLYPVRWARGDYYRGPPDDLNQEPDEEWVKSLQDEGKAYQEWDEDADVDES
DASCEDSLAISAAQREKKLLNGMIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCPN
LTHLDLTQTDVTDSAFDSWSSLWACLSLEHLDLSGCEKITDRTLKKLSLGLGDLASPTCS
DRRAKLLKSPPSPISLDKRSLRPTGHSRQVLIFKQWPGRLGRAPCSPTRVWVLDPLELAD
IEDTAEWNRLRGVSTPEVRGFVETQPGGLSCCCRRRRGGFRTGFSTSYRQKQYGLGEAGC
GHSTCCTGETALRTLGGLQYESHTTRGSAGAEFRTKCSSGGQLCLECDNRTDQSDGRCSL
RFLSLSGCYQVTDLGLRALSQRGGLPHLEHLNLSGCLLITEVGLQELVSACPALNDEHFY
YCDNINGPHADTASGCQNLQCGFRVCCRSGE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctccttttcccgacgaggtggatgttttcactgggccacactggcgaatgaaacag
ttggtgggactttactgtgagaagctgtcacagaccaacttctccaacaacaatgacttc
cgctcatttcttcagtcgctgtgtgctaccttcaaggagttcaagatgcatgaacagatt
gagaatgagtacatcatcggcctgttgcagcagcgcagctgcaatgtgtataatgtacac
tccgacaacaagctctcagagatgttgtccctgtttgagaaagggctgagaagcattaag
agtgaaaatgagcagctcaactatgcccagcagctgaaggaaagacttgaggcattcaca
caggacttcttaccccatatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacttatgaggagctgaaagacatcaagaagcaggtgatagcgcagcacagtagc
cagcagcgatggaactgtgcagcagaggtgctgaaagggctcagtctgtggagccaggca
gaggagctgcataaggccttcaagtatgctgaccatgagaagactgatgatgaattggag
aaagagctgtgctccgcccacatctcccagctgcccacagaggtcctgctgtgtctgttc
cgctacctgggccctgaggacctgtgtcactgtggccaggtgtgctctgcctggtctgac
ctggccaagaccggctctctgtggagacacctctaccctgtacgctgggccagaggggat
tactatcgcggtcccccagatgatctgaaccaggagccggatgaggagtgggtgaaaagt
ctgcaggatgagggcaaggcctaccaggagtgggatgaggatgcagatgtggatgagtct
gatgcatcttgtgaagactccttggctataagtgctgctcagagggagaagaagctattg
aatggaatgatccagaaccttctgccagctgtgggttcctctgtcaggtccatcgttctg
gcctacagctctacggtctccagtaagatggtgcgtcagatcctcagtctctgtcctaat
ctcacccacctggacctcactcagactgatgtcacagactccgcctttgacagttggtca
tctctgtgggcatgtctctctctggagcatctagacctttcaggctgtgagaagatcact
gaccgcacactgaagaagctgtccctgggtcttggggacctggcatctcccacctgctct
gaccgacgagccaagcttctgaagagccctccttctcccatcagtctcgacaagcgcagc
ctccgtccgactgggcacagccggcaggtcctgatcttcaagcagtggccagggagactg
ggcagagccccctgcagccccaccagggtctgggtcctggaccccttggagctggctgac
atcgaggatactgcggagtggaaccgactcaggggagtgtctacccctgaggtgcggggc
tttgtggagactcagccaggggggttgtcgtgttgctgtaggagaaggagggggggcttc
aggactggctttagcacctcctacaggcagaagcagtatgggcttggggaggccggctgt
ggccattccacctgctgcactggtgagacggccctgaggactttaggagggctgcagtat
gagtcacacaccaccaggggcagtgcaggggcagagtttcggactaaatgctcctctggg
ggccagttgtgcctggagtgtgacaacagaactgatcagtcagacggtcggtgctcacta
aggttcctcagcctgtctggatgctatcaggtcacagacctgggcttgagggcactgtct
cagcgtggagggcttcctcacctggagcatctgaacctgtctggatgtctcctcatcact
gaggtggggctacaggagctggtgtcagcctgtcctgccctcaatgatgaacacttctac
tactgcgacaacatcaacggtcctcacgctgacacggccagcggctgccagaacctgcag
tgtggcttcagggtgtgctgtcgctctggagagtga
DBGET
integrated database retrieval system
