Oncorhynchus nerka (sockeye salmon): 115108535
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Entry
115108535 CDS
T07952
Name
(RefSeq) mast/stem cell growth factor receptor Kit-like isoform X1
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115108535
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115108535
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115108535
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
one04090
]
115108535
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115108535
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115108535
CD molecules [BR:
one04090
]
Proteins
115108535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR1-3_N_Ig-like
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
115108535
NCBI-ProteinID:
XP_029488861
LinkDB
All DBs
Position
LG24:53527623..53567844
Genome browser
AA seq
1034 aa
AA seq
DB search
MGCFRFTNRIIQSALSPGCSAWWALAGWWSVKESSAQYVVPGESLSWTQCPGSARPTITP
RGLHLVIPLNIPFSLLCQGDQVVQWQREDRPKLRGEERTNGASVLKIPRAQPGHMGRYIC
LEEKTGEQSSIYVYVKDPDNVFRKTIVFSILTRAGDSASIPCLATDPRVVNLRLEPCHGG
ALPNGLHYAASLERGMVIYDTKKAFEGCYICTGRLSGALVKSHSYDLTVRPVPDVPPVIE
LRGPKRVVLTRGQNLTLTCSTTNVNGDIKLKWAAPPGTDAVWASYPQQPAVENGSRILTE
PITHVRSATLQVNSVGTQDSGRYRCEGQNEKGISSESIWLDVYDRGFINLAPSDNSSVRV
RAGESLSLHVDMEAYPKPHTFSWSFSGQQLRNTSDHVITKQNHRHRYNSELRLVRLKMSE
SGVYTFYASNGDATINQSFTVYVISKPEIVSHDGPVDGQVRCVAEGYPAPQITWYYCEQP
YMRCSHQMNATQEEQDIVTVTLLSPSFGKTEVESRLNITTGRFHTLECVATVEGEQDFTL
FSISERTVPHELFTPLLIGILSASALLILILIVLFYKYLQKPKYQIQWKVIEGIHGNNYV
YIDPTQLPYDHEWEFPRDKLRFGKTLGSGAFGKVVEATAYGMSKADTVMTVAVKMLKPSA
HATEKEALMSELKVLSYLGNHMNIVNLLGACTVGGPTLVITEYCCFGDLLNFLRKKRETF
FCDTLGEDCYYRNVLLQRETATDGDSRNGYMDMRPSVASVLPNGVSSEKRISIRKPGGSS
SEPDVVSEMLHEDSLSLDTEDLLSFSYQVAKGMDFLASKNCIHRDLAARNILLTQGRVAK
ICDFGLARDITTDSNYVVKGNARLPVKWMSPESIFECVYTFESDVWSYGILLWEIFSLGS
SPYPGMLVDSKFYKMIKEGYRMDAPEFAPSEMYEIMRSCWDSNPFKRHSFSKVVERIEQQ
LSDTTKHIYLNFSSRFPVTMGQQVTSVDQGAQNANILCLNSVGNSNASTQPLLASASDDI
FLGEMATGLRVHQV
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtttcagatttacgaacagaataatacaaagtgctctgagtccaggttgttct
gcatggtgggctttggctggttggtggtctgttaaagagagcagtgcacagtacgttgta
cctggcgagtctttgtcctggacgcaatgcccaggtagcgccagacccaccatcaccccc
agaggcctccacctggtcattccactcaacatccccttcagcctgctttgccagggtgac
caggtggtgcagtggcagcgggaggatcgccccaaactgaggggcgaggagcggactaat
ggggcgtccgtcctgaaaatccccagagctcagcctggccacatgggccgatacatctgt
ctggaagagaaaaccggagagcagagctctatctacgtctacgtcaaagatcctgataat
gtcttcagaaagaccattgtgttcagtatcctgactcgtgcgggagacagtgcctccatc
ccctgcctagcaaccgacccgagagtggtcaacctgcgcctggagccatgccatggcggt
gccctccctaatggtctccactatgctgccagcctggagcggggcatggttatctatgac
actaagaaggcctttgagggctgttacatctgcactggcagactgagcggtgccctcgtt
aaatcacacagctatgatctgactgtgcgaccagtcccagatgtgccccctgtgattgag
ttgcgtgggcccaagagggtggtcctgacgcggggccagaatctcaccctgacctgcagc
accaccaacgtcaatggagacatcaagctgaagtgggctgctccgccgggcacggatgcc
gtgtgggcttcgtatccacagcaaccggcagtggagaatggctcacgcatcctgactgag
cccatcacacacgtccgcagcgctacactccaagtcaactctgtcgggacacaggattct
gggagatatcgatgtgagggtcagaatgagaaggggatcagctctgagtcaatctggctg
gacgtctatgatagaggtttcatcaacctggctccgtcagataacagttctgtgcgtgtg
cgtgctggggagagtctgtccctgcatgtggacatggaggcctatcccaaaccgcacacc
ttctcctggagcttctcaggccagcagctgaggaacacctctgatcatgtcatcaccaaa
cagaaccaccgacacaggtacaacagtgagctcaggctggtgcgtttgaaaatgtcagag
agtggggtctacaccttttatgcctcgaatggtgatgcaacaatcaatcagtcatttacc
gtctacgttatcagtaaaccagagattgtatctcatgatggcccagttgatggacaggtg
cggtgtgtagctgagggataccctgccccacagatcacctggtactactgtgaacagcct
tatatgaggtgctcccaccagatgaacgccactcaggaggagcaggacattgtcacagtg
acgttgttgagtccttcctttgggaagactgaggtggagagcaggctgaacattaccaca
ggaagattccacacgctggagtgtgtggccaccgtggagggagagcaggacttcacactg
ttctctatcagtgagagaacagttccccatgagctcttcacacctctgctgattggcata
ttgtcagcctctgccctcctcatcctcatcctcatagtgctcttctacaagtacctgcag
aaacccaaataccagatccagtggaaagtcattgaaggtatccacggaaacaactatgtg
tatattgaccctacccagctcccatacgatcacgagtgggagttcccccgggacaaactg
cgtttcgggaaaactctgggctccggagccttcgggaaggtagtggaggctactgcttat
ggaatgtccaaagctgatacagtgatgacagtggcggtcaaaatgctcaaacccagtgcc
catgccactgagaaggaggctctgatgtcggagctgaaagttctcagttacctgggaaac
cacatgaacattgtcaacctgctgggagcctgtactgttggaggcccaaccctggtgatc
acagagtattgctgcttcggtgacctcctcaactttctgaggaagaagagggagacgttc
ttttgtgacacgttaggggaggactgctactacaggaatgtcctgctgcagagggagaca
gctacagatggagacagcaggaatggctacatggatatgaggccttctgtcgctagtgtc
ctgcccaatggcgtctcctcagagaagagaatctcgatacgcaaaccaggtggttccagt
agtgagcctgatgttgtgagtgagatgctccatgaggacagtctctctctggacactgag
gatctgctcagcttctcctatcaagtggccaaaggcatggacttcctggcttctaaaaat
tgcatccacagagacctggctgcccggaacattctgctgactcaggggcgagtggcaaag
atctgtgacttcggcctggcccgtgacatcaccacagactccaactatgtagtcaaaggc
aatgcccgcctcccagtcaagtggatgtctccagagagcatctttgaatgtgtgtacaca
tttgagagtgacgtatggtcctatggcatcttgctctgggaaatcttctcactcggaagc
agtccatatcctgggatgcttgtggactcaaagttctacaaaatgattaaggaaggatat
agaatggatgcaccagagtttgcaccgagtgaaatgtatgagataatgaggtcgtgctgg
gactcgaacccctttaagagacactccttcagcaaggtggtggagaggattgaacaacag
ctgtcagacaccacaaaacacatctatctgaacttcagctccaggtttccggttacaatg
gggcaacaggttaccagcgtggaccagggggcgcagaatgccaacatcctttgccttaac
tctgtgggcaacagcaacgcctccactcagcccctattggccagcgccagcgatgacatc
tttctgggggagatggccactgggctcagggtccaccaggtgtaa
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