Oncorhynchus nerka (sockeye salmon): 115108546
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Entry
115108546 CDS
T07952
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108546
Membrane trafficking [BR:
one04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
115108546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
LRR_4
Motif
Other DBs
NCBI-GeneID:
115108546
NCBI-ProteinID:
XP_029488881
LinkDB
All DBs
Position
LG24:complement(53864260..53901940)
Genome browser
AA seq
1527 aa
AA seq
DB search
MASKEITASCFVSVSRDVTESIRKIIDKSSTKFIRGIKLETKNGKSEDRILVLTTWRLYL
LAAKVPTKIEVTFNFLEIRAMKSHPEHQVVIDTDKSTYSLWLQSRDHLSHVVSHVNFALS
RIFNNSVFAPSICHSDSELSEGSRKHSPSSETSMETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLVDFSHLESRDLAVIVASLAYNTWFTKLYCKDIRIGLEVTE
QVLHTLSKSSSLEEITLENAGLKSDFPQKLSVALSENPASVIHSLNLAHNTLDNQGVANL
IQQVCRLSKGLRLLNLSKTFLNSKGVVSQTLCSSDEYSNSLLHLDLSKNPGFLSGEDASN
LCLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSYLNLSKNTFSHRKVKENLPLF
CQFFSSAFSLTHVSLASMKLPPEALRSLFIGLTTNPHINDLHLDISGCELKSAGASVIQE
LFPRLSSIATLDISDNGLDADLLSVLPALSKHTSLKHLYLGKNFNIKSRVLDEILHKLVQ
LIQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDIGAKMLSKALQI
NTTLRSVTWDRNNTSATGFLDVARALEHNFTLQYMPLPLSDISQAYRSTSERTEQALTKI
QRALLRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLSVCVQQQVCVLRGVGEMEEIQAA
KQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDQLAGELTRAADKELQVIVDSMMSLC
RELCPLSSSAAERLRPQLSSVSERVSFPRSAIRTALMERAAQDIHRALEEVKLSVVSYLT
NSIVDQILQELYATHKTLTRRVSQVKRWEVTCDGGTGLRSHRHRDSLDLTDDEMGTSIVS
IDTIAIKKRSSRTRRIRPVSTRLSQCDDSSSSTPPSVSSSFSSFSALSRSTSWEGLSELP
TQGAPLHHVTRVRPRPPRMHRAGHAPSDTHCTENGAVTPIDHGLPDFYTKRVLPDSQLSS
LHKAHSLRRKKRRNMLAIFGFRRNRNSTLSNQGPDSGGDGCGEECCTVAMAPTGTATENV
YTLLQPPLSAARAGSPGEGGDVEDQRLEEPVGLSLQPVQSIPPQPGMPGSRHPFYSLSQQ
SELETEHEQPADIDRQVDREWTEDRWVDRQWTEGNHTVRERTLLRPADRQAEQHWPEDKP
SDKTWTEGRTADRYWTESRHADRHMERQWTVDRQFDQDRQWTVSRQQTDRTWAEGRPKDL
QIDRQWIDSRQSGRQTDRQDQGRHLAQRPLPPYPSDRTPSPKSETDSQKNMDRQKYSDTQ
TDRHLRSDTAVGQVEGWRDGGGVPPGRVSTSASKPDPPSQSSKPNLSKLRQRHLQESSEE
EAGRERDGGRMERKERERDKRDAEGQPPPIPEKPKTSSYVSSPNEYANERPIPPPAPSAF
RRPLLGLAYRAVSQGEEAGRPQAPVKPQRNRKAMSCDTGTDRDSPNNLEKPSNRKPPVKK
PRLPQNRNKSLDYPDSVNLASGNSKLL
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagagataactgcctcttgttttgtcagtgtgagcagggatgttacagag
agtatcaggaagattattgacaagtcctcaaccaagtttatacgtggcataaagcttgaa
accaaaaatggcaaatcagaggataggatactggttctcacaacatggaggctctatctc
ctggccgccaaggttccaacaaagatagaggtgacatttaacttcttggagatccgagcc
atgaaaagtcacccagagcatcaggtcgtcatagacacggacaagtccacttattccttg
tggctacagtcacgtgaccacctcagtcatgtggtcagccatgttaactttgccctgtcc
agaatatttaacaactctgtgtttgctccctccatctgtcattcagacagtgaactttct
gagggaagcaggaagcactcccccagctcagagacgtctatggaaacccagagggcctgt
ggagggttttcggagacctacgctgccctgtgtgactataatggaatcagctgcaaggag
gaagttcagtgggatgtggacactatctatcactcccaagacaacagggagtttaatcta
gtggacttcagccacctggaaagcagggacttggcagttattgtggcatcactggcgtac
aatacctggttcaccaaactatactgtaaggacatacgcatagggttagaggtcactgag
caggttctgcacaccctcagtaagtcctccagtctggaagagatcacgctggagaatgct
ggtctcaaatctgactttcctcagaagctgtcagttgcgctctcagagaatcctgcttct
gtcatccactctctgaatctggcccacaacacactggacaaccaaggtgtggctaacctc
atccagcaagtgtgtcgcctcagcaaaggactgcgtctcctcaacctctccaagaccttc
ctcaactccaaaggtgtggtgtctcagactctgtgctccagtgatgagtattctaactct
ctgctgcacctggacctgagcaagaaccctgggttcctgtctggggaggatgcctcgaat
ctgtgcctgttcctgtcccagcctaattgtctggtccatttggacctgtctggcactgac
tgttctgttgactcgctatttggggctctgctgaggggttgttgtgccgatctctcctac
ttgaatctctccaaaaataccttctcccacaggaaagtgaaggagaacctgccgttgttc
tgtcagttcttcagctcggccttcagtctcacccatgtcagcctggcctctatgaagctg
ccccctgaggccctgaggtctctcttcatcggtctgaccacaaaccctcacatcaatgac
ctacacctggacattagtggctgtgagctgaaatctgcaggagcttctgtgatccaggag
ctgttccccaggctctcctccatcgccactctggacatctcagacaacgggctggatgca
gaccttctctcagttctaccagctctctccaaacacacctccctaaagcacctgtatctg
ggcaagaacttcaacatcaagagcagggtgctggatgaaattctacacaagctggtccaa
ctcatacaggaggaggaatgtgccctccagtccctctcactggctgactcgcggctgcgt
tctcggggcacagtgctggtaaacgctctgggcagcaacacctgtctgcgaaaggtggac
ctgagtgggaacagcctggaggacattggagccaagatgctgagcaaagccctacagatc
aacaccacactcaggagtgtgacgtgggatcgtaacaacacctcagctacaggattcctg
gatgtggctcgagcccttgaacataacttcactttgcagtacatgcccctccccctcagt
gacatcagccaggcataccgtagtacctccgagaggacagagcaggcactgaccaagatc
cagcgtgctctgctgcggaacaaccagactcagcgcttctctcagagacaggctctacgg
ctgcaccagggcctggtcaccagcactgctgaacaggtgatggagcgtctgagtgtgtgt
gtgcagcagcaggtgtgtgtgctgcgtggagtaggggagatggaggagattcaagctgct
aaacaggtgctgaaggaggccagaaactcccgtgcgctgtacccctctctctgtgagcta
gctcatgtgctgtcagtagacgggccagtcagacagagactggaccaactggcaggggaa
ctgaccagagcagctgacaaggaactacaggtgattgtcgattccatgatgtctctctgt
cgtgagttgtgcccgctgtcctcctctgctgcggagagattacgtcctcagctctcgtct
gtctcggagcgcgtctccttccctcgctccgccatccgcacagccttgatggagagagca
gcacaggacattcaccgagcgctggaggaggtgaagctctcagtggtctcctatctcacc
aactccatcgtggatcagatcttgcaggagctctacgccactcacaagactctgacgcgg
cgggtgtcccaggtgaagcgctgggaggtaacatgtgacggaggaacaggtctgaggtca
cacagacacagagactctctggacctcacagatgatgagatgggcaccagtatagtgagc
attgacacaattgccattaagaagcgtagctctagaactagacgtattcgacctgtctct
accagactgagccagtgtgatgactccagctcctccacacccccctctgtgtcctcttct
ttctcttctttctcggccctctctcgctctacatcctgggaggggctgtctgagctccct
acccaaggtgcacctctccatcatgtgacgcgggttaggccgaggcccccacggatgcac
cgagcaggacatgccccctctgacacacattgcactgaaaatggagctgtcacccctatt
gatcatggactcccagatttctacaccaagagagtgctccctgatagtcagttgtcctct
cttcataaagcccactctctcagacgaaagaagagacgcaatatgctggccatctttggt
ttccgtaggaaccgcaactcaacgctctccaaccaggggccagattctggcggagacgga
tgtggggaagagtgttgcactgtcgccatggcacccacagggacagccactgagaatgtc
tacacgctgctgcagccccctctttctgctgccagggcaggctctcctggtgaggggggt
gatgtggaggaccagagattggaggagccagtgggcctgagcctgcagccagtgcagagc
ataccaccacagcctggcatgccaggtagcagacaccccttctactcactcagccagcaa
tcagagctagaaacagagcacgagcaacctgcagatatagacagacaggtggacagagag
tggacagaggacaggtgggtggacagacagtggacagaggggaatcacacagtcagagag
aggacattattaagaccggctgacagacaggctgaacagcactggccagaggacaaaccg
tcagacaaaacatggacagagggaagaacggcagatagatattggacggagagcaggcat
gcagatagacacatggaaagacagtggacagttgacagacagtttgatcaagatagacag
tggacagtgagcagacaacagacagacagaacgtgggcagagggtcgaccaaaagaccta
cagatagacagacagtggatagacagcaggcagtcaggcagacagactgacagacaagac
cagggacgacatctggctcagagacctctgcccccttacccatcagacaggactccatca
cctaaaagtgaaactgactctcagaaaaacatggacaggcagaagtactctgacacacag
acggacagacacctgcgctcagacactgctgtaggacaggtggaagggtggcgggatgga
ggaggggttccccctggacgggtttctacgagtgcatctaaaccagaccctccttcccag
agcagcaaacccaatctgtccaaactgagacagagacatctacaggagagctctgaggag
gaagcaggcagagagagggatggtggaagaatggaaaggaaagagagagagagagacaaa
agagatgcagagggacagcctcctcccattcctgaaaagccaaagacatcatcctatgtg
tcttctccaaacgagtatgccaatgaaaggccgatcccgcctcctgcaccatctgcattc
agaaggccattgctgggattggcttacagggctgtcagccaaggtgaggaagcagggagg
cctcaagcccccgtgaaaccccagaggaacagaaaggctatgtcttgtgacacaggcact
gacagggatagccctaataatcttgagaagccctcaaatcgcaaaccccctgtgaaaaag
cctagactaccccagaacagaaacaaatccttggactatcctgacagtgtcaacttagcg
tctggtaacagcaagctgttgtga
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