Oncorhynchus nerka (sockeye salmon): 115108565
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Entry
115108565 CDS
T07952
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D-like
KO
K22038
volume-regulated anion channel
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115108565
Ion channels [BR:
one04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
115108565
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
115108565
NCBI-ProteinID:
XP_029488921
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Position
LG24:55510254..55521056
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AA seq
847 aa
AA seq
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MMFTLTEVAALNDIQPTYRILKPWWDVFMDYLGVVMLMLAIFSGTMQLTKDQVVCLPILE
PASEDPSGFTTPQPAEGSGSGSGNGGSRVTLAATPLVTKDLPDSVVHQIHFTHSGGVGQQ
PLPTGVRTNLDFQQYVFVNQMCYHVALPWYSKYFPYLALIHTIVLMVSSNFWFKYPKTCS
KIEHFVGILGKCFESPWTTKALSETACEDSEENKQRLTGAPFLPKHFSTSSEEGSPNQST
PMLAKSGVKFTADKPVIEVPCMTILDNKDGEQAKALFEKVRKFRTHVEDSDLIYKLYVAQ
TVIKTVKFILILCYTMTFVAAIDFDHVCEPDIKHLTGYTKFQCTHNMAFMLRKLLVSYIS
LVCIYGLICIYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYS
KRFGVFLSEVSENKLREISLNHEWTFEKLRQHVTHNAQDKLELHLFMLSGLPDAVFDLTD
LEILKLELIPEARITAKISQMINIQELHFYHCPAKVEQTAFSFLRDHLRCLHVKFTDVAE
IPTWVYLLKSLRELYLVGNLNSENNKMIGLESLRDLRHLKILHLKSNLTKVPTNITDLSP
HLIKLVVHNDGTKLLVLNSLKKMMNLAELELHNCELERIPHAIFSLTNLQELDLKSNNIR
TIEEVISFQHLKRLICLKLWHNKIITIPLSISHVKNLESLYLSHNKLESLPVPLFNLLKL
RYLDISHNSIAVIPLEIGFMQNLQHFAITGNKVEVVPKQLFKCTKLRTLSLGHNCIAVLP
EKIGNLVQLTNLELKGNCLDRLPPQLGQCHLLRRNCLLVEDHLFDSLPLEIKESINQEAN
VPFANGV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttactcttaccgaggtagccgccctgaatgacatccagccaacctatcggatc
ctgaaaccatggtgggacgtctttatggactacctgggcgtcgtcatgctgatgctagcc
atattttctggaaccatgcagttaaccaaagaccaggtggtttgccttcctatcctggaa
ccagcttcagaggaccccagcggcttcacaacaccgcagccagcggaggggtctggttct
gggtcagggaacggaggaagtagggtgacgctagccgccactcccctagtgactaaggat
ctaccggatagtgttgttcatcagattcactttacacattctggtggtgttggacagcag
cctctgccaacaggcgtcaggacaaacctggactttcagcaatatgtttttgtcaaccag
atgtgctaccatgtcgccctgccgtggtattctaaatacttcccataccttgctctcata
cacaccatcgtcctcatggtcagcagtaacttctggttcaaatatccaaagacttgttcg
aaaatagagcattttgtggggattctggggaagtgttttgagtctccttggacgaccaag
gcattatctgagacggcatgtgaggactcagaggagaataagcaaaggctcactggtgcc
cctttcctgccaaaacatttctcaaccagcagtgaagagggaagtcctaaccagtccacc
ccgatgctggctaagtctggggtcaagttcactgctgataagcctgtcattgaagtccca
tgcatgaccatactagacaataaagatggagagcaggccaaggccctatttgaaaaggtt
aggaaattccgtactcacgtggaagacagtgatttgatctacaagctctacgttgcccaa
acagtgatcaaaactgtgaagttcattttgatcttgtgttacacaatgacatttgttgct
gccattgactttgaccatgtgtgtgagcctgacataaaacatttaactggatacactaaa
ttccaatgcacacataacatggcattcatgttaaggaagctgcttgtcagctatatttcc
ctcgtctgtatatacggcctcatctgtatatacactctcttctggctctttcgacgacct
ctcaaggagtactctttcgagaaagtcagagaggagagtagcttcagtgacattcctgac
gtgaagaacgactttgcgtttctcttgcacatggtcgatcagtacgaccagctgtactct
aagcgttttggtgtcttcctctctgaagtcagtgagaacaagctgcgggagatcagcttg
aatcacgagtggacattcgagaaactgagacagcatgtaacccacaacgctcaggacaaa
ctggagctccatctcttcatgctgtcaggtttgccagacgctgtctttgacctgacagat
ctggagatcctgaagctggagctgatcccagaggccaggataacagccaagatctcccag
atgatcaacattcaggagctacacttctaccactgtcctgccaaagtcgagcagaccgcg
ttcagtttccttcgtgaccacctccggtgccttcatgtcaagtttacggatgtagccgag
atccccacttgggtgtacctgttgaaaagtctgagggagctgtacttggtcgggaatctg
aattctgaaaacaacaagatgatcggtttagaatctctcagagacctgaggcatctaaag
attctgcatctaaaaagcaatttgacgaaggtcccgaccaacataacagatctctctcca
cacctgatcaagctggtggtacacaatgatggtactaaactcctggtactgaacagtttg
aagaaaatgatgaacctagctgaactagagcttcacaactgtgaactggagaggataccc
catgctattttcagtttgaccaacctgcaggagctggacctgaaatccaacaacattcgt
accattgaggaggtcatcagcttccagcacctcaagaggctgatctgcctcaaactgtgg
cacaataaaatcattaccattccattgtcaataagccatgtcaaaaaccttgagtccctc
tacctttctcacaataaacttgaatctctgcccgtacccttgtttaacctgctcaagctg
aggtatctggacattagccacaactccatagcggtgattccgctggagattggttttatg
cagaacctccagcactttgccattacaggcaacaaggtggaggtagtacccaagcagctg
tttaagtgcaccaaactgaggacactaagtctgggacacaattgtatcgccgtccttcca
gagaagattggcaatctggtgcagctaacaaacctggagctgaagggaaactgtctggac
cgcctgccgccccagctaggccagtgtcacctcctccgcaggaactgcctgttggtggag
gaccacctgtttgactcactccccctagagatcaaggagagtatcaatcaggaagccaac
gtgccctttgctaatggggtgtga
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