Oncorhynchus nerka (sockeye salmon): 115108566
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Entry
115108566 CDS
T07952
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C-like isoform X1
KO
K22038
volume-regulated anion channel
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115108566
Ion channels [BR:
one04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
115108566
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_At5g56370
LRR_R13L1-DRL21
LRR_5
LRR_9
Rota_NSP3
TEX29
Motif
Other DBs
NCBI-GeneID:
115108566
NCBI-ProteinID:
XP_029488922
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Position
LG24:55418477..55496959
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AA seq
798 aa
AA seq
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MIPVTEFRQFSEQEPAFRVLKPWWDVFTDYLSVVMLMIGVFGCTLQVVQDKIICLPQRIS
MANQTIPLSNKTELVSPVVSQDVHEMMGLKTNLDLQQYSFINQMCYEKALHWYAKYFPYL
VLIHTLIFMVCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGENPEEKVLLD
NKNNSASKEILNVSVEGNLDSLEKTQSLKSIPEKIVVDKPTASALDKKEGEQAKALFEKV
KKFRLHVEEGEILYVMYVRQTVLKVFKFLLIIAYNSALVSEVQITVKCSVDIQDMTGYKH
FSCNHTMAHLFSKLSYCYLCFVAVYGFTCLYTSYWLFYRSLKEYSFEYVRQETGIDDIPD
VKNDFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTPEKLRQRLLTNHNNR
LELQLFMLSGLPDTIFEVTELQSLKLEIINNVTIPASIAQLENLQELSLYQCCLKSHTTA
TSFLKDNLKVLRVKFDDSRELPHWLYHLRNLEELYLIGSLSPDASKNVVLESLRELKNLK
TLSLKSNFTKIPQSIVDVSSHLQKLYVYNDGTKLVMLNNLKKMVNLTELELVHCDLERIP
HAVFSLTNLQELDLKENNLRSIEEIVSCQHLHKLTCLKLWHNSICYIPEHIKKLGSLERL
YFSHNKIEILPSHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLQYFSVTCNKIENLPDEL
FFCKKLKTLKLGKNTLSLLSPKISYLVLLTQLELKGNHFELLPPELRFCRALKRGGLVVE
DVLFETLPSDIRDKMKAE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgacggagttccggcagttctcagagcaggagccagcattccgggttctg
aagccctggtgggatgtgttcacagactacctctctgtggtcatgttaatgatcggagtg
ttcggatgcaccctacaggtggtgcaggacaaaatcatctgccttccacagagaatatca
atggcgaatcaaacaatacccttatcaaataaaaccgagctggtctcacctgtagtgtcg
caggatgtgcatgagatgatgggcctgaaaaccaacctggaccttcaacagtacagcttc
ataaaccagatgtgctacgagaaagccctgcactggtacgccaagtacttcccttaccta
gtcctcatacacaccctcatcttcatggtgtgcagcaatttctggttcaagttcccaggc
tccagctctaagatagagcatttcatctccatcttgggaaagtgctttgactccccctgg
actactagagctctgtctgaggtgtctggagagaacccagaggagaaggtattgttggac
aacaagaacaacagtgccagcaaagagatcctcaacgtgtctgtagaggggaacctggac
agcctggagaagacccagtccctcaaatccatcccagagaagatcgtagtggacaagccc
acagccagcgctctggataagaaggaaggagaacaggccaaagctctatttgagaaggtg
aagaagttccgcctgcatgtcgaagagggggaaatcctctatgttatgtatgttcgccag
actgttctcaaagtgttcaaattcctcctcatcatcgcgtataacagtgctttagtctct
gaggtgcagatcacagtgaagtgcagtgtggacatacaggacatgacgggatataagcat
ttctcctgtaatcacaccatggcccacctgttctctaagttgtcgtactgttacctgtgc
ttcgtggctgtgtacggattcacctgcctctacacttcttactggctcttctaccgctca
ctgaaggagtactcctttgaatatgtgcggcaagaaacgggaatcgatgacatcccagac
gtgaagaatgactttgccttcatgctgcacatgatcgaccagtacgacccactgtactcc
aaaaggttcgcagtgttcctgtctgaggtcagtgagaacaaactgaaacagctgaatctg
aaccacgagtggacaccagagaagctgcgtcagagactgctgaccaaccataacaacaga
ctggagctgcagctgttcatgctgtctgggctcccagacaccatcttcgaggtgacagag
ctccaatccctgaagctagagatcatcaacaatgtaaccatcccagcctccatcgcccag
ctggaaaacctccaggagctatctctgtatcagtgttgcttaaagagccacaccacagcc
acttccttcctcaaggataaccttaaggtgctcagggtaaagtttgatgacagcagggaa
ctgcctcattggctataccatctgcggaatctagaggagctctatctcattggctcactg
agtcctgatgcttctaagaatgtggttctggagtctctaagggagctgaagaatctgaag
accctctcgctcaaaagtaactttacaaagattccccagtccatcgtagacgtgtccagc
cacctgcagaagctgtacgtttacaatgatggcaccaagctggtgatgctcaacaacctg
aagaagatggtgaacctgactgaactggagctcgtgcactgtgacctggaacgcatccca
catgctgtctttagcctcacaaacctacaggagttggacttgaaggaaaacaacctgcgc
tccattgaggagatagtcagctgccagcacctccacaagctgacgtgcctgaaactctgg
cacaacagtatctgctacatccctgagcacatcaagaagcttggcagcctggagcgcctc
tacttcagccacaacaagatagagatcttgccctcgcacctgttcttatgcaacaagctt
cgttacctggacctgtccaacaacgacatccggttcattccgccggagattggcgtccta
cagagtcttcagtatttctctgtcacgtgcaacaagatcgagaacctcccagacgagctc
ttcttttgcaagaagctcaaaacccttaagctgggcaagaatacgctgtcattgctctcc
ccaaagatctcatacctggttctattgacacaactggaactgaagggcaaccattttgag
ctcctgcctccagagctgcggttctgccgggcgttgaagcgtggcggcctagtggtggag
gacgtcctgtttgaaaccttgccttcagatatcagagacaaaatgaaggctgagtga
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