Oncorhynchus nerka (sockeye salmon): 115108598
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Entry
115108598 CDS
T07952
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108598
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115108598
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
Motif
Other DBs
NCBI-GeneID:
115108598
NCBI-ProteinID:
XP_029488985
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All DBs
Position
LG24:complement(57998963..58095968)
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AA seq
1528 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKITRKNNLNFSELLRPFCRLTSEGHMRDPNN
QVQVVKNLRISVNNVVTRPSVPTSGVHSPAQRRLLSEVVSANQPAEGGVANVITAGDYDL
NISVDLAWIKQPPLTLTYNRSVKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFL
QSMPASDHEFLNHYLACLLVVSSSEAVPVEQFLKLSQEQHMIQHNGEYTNPKWFIPNTLK
YYVLLHDMSQGDEQRADSVYEDMKQRYGSQGCYLLKINSRTAAAGTDEQIPDPWSQYLNK
SSLQSQDQSEEPAPTPVVVNNTAVENNIGGAPEMDGAPEMDGHDSAENDGVFVNSLDNTH
PLQLETAIDMPGSLDSLRAVALETKTTTVYTGVAAGTSHGACLTLNDHNRLRLFIQEFTF
RGLLPHIEKNIRQLNDQLVSRKGLSRSLFSVTKKLFGGGKVPEKSIAELKNTSGLLYHPE
APELQIRKMADLCFLVQHYELAYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQGGAP
RPYPAHYMDTAIQTYRDVCKNKVLAERCALFSAEVLKSQAKYSDAATLLIKMTSEDSDLC
SALLLEQAAHCFINMRNPMVRKFAFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWS
LAEDHINFTIGRQSFTLRQPENAVLAFRHILTNDSQQTATQQGAFLREYLYVYRNVPGVC
EVALPQLPLPCINSSATRVYFGHERRLAEGEKQAATHVSLDQEFDQDLAAVWQDLEEQVV
AAANRGVVPSTFYPTQCCLNSQTDNLHFPLAVVEEPIIVEVAFRNPLKVPLVLSDLSLLW
KFTLKDFSRPQPQDVMVGDAVTITNEKEAIAPRTVQKDGIITTEVIPEFFMSPEETRVAR
LKLLPRQTGQLTILGLVYNLASTPSTGETTINSNSFSQNQGPSATAGTLVRGRQDLEIQG
PRLNQTKEEKTSVSHGPDRRLDPTITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNVSH
VPLCGLRVASTHPDFFTFGSSSLATPLSPSSFENCSAYKTLATPPGATPGSVTAVTLVSA
ADFGSGGGVVSGTGGKRVAEIPLGEGTLTPGESTQLPLWLRGPDQEGVHEINFLFYYEGA
EKGGKISHRVLRHTVFICASRSLSVRATACHSNTLPEEEGRNGSMLVFVDVENINTSEAG
VREFHIAQVSSSSKQWRLHKCINPAENKDCKLTTRERGKLCFRATRCKPHEATSKSLEKY
TFADLSLGNEQIISSTTPCADFFFRRCQPSESWRPLIAVETQGRHSRSQGAGPGGGAADI
TGVVRKCNEVDLDIIVLWKAYVVEDNKQVILEGQLHVALQTIGKEACSLRQKEEAQEMVL
LKFKPELPPPITRPSMEQLSHLIKTNLHYPESYSHSFVQKSLCMVPVILTLSNCSLAQVD
AIIDLRHKTTSPESLEVHGSFTWLGQTQYKLQLRAQEVMRLPLRAGFLHAGVYNLGTARV
FAKLADQGAMCETSQQTATPALIIINST
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtctgtgcaggagttcatccaggactcgtttgttccaatggtg
gctgtcctgtgcagcgaagatgcggaaaaaattactcgtaaaaacaaccttaatttctcg
gagctgttaagacctttctgccggttaacctccgaaggtcacatgagggaccctaacaac
caggtgcaggtggtgaagaaccttcgcatcagtgtaaacaatgtggttacacgcccgtct
gtccccacctccggcgtccatagccccgcccagcgacggctcctcagcgaggtggtgtcg
gcgaaccaaccagcagaggggggtgtggccaatgtcatcaccgctggagactatgacctt
aatattagtgtggaccttgcttggatcaaacagcctcctctaaccctaacctacaatcgc
tctgttaaagctagcgtcccctggtacagtgactggagggacacactaacggaactcagc
acctccaagcattatacagccacgactccctggtttgaggcgtacagggagagcttcctc
cagtcaatgcctgcctccgaccatgagttcctcaaccactacctcgcctgtctgttggtg
gtgtcgtccagtgaggctgtaccagtggagcagttcctcaagctgtctcaggagcagcac
atgatccaacacaatggagagtacaccaaccccaagtggttcatccccaacacactcaaa
tactacgtcctcctgcatgacatgagccagggggacgaacagagagctgactctgtgtat
gaggatatgaagcagaggtatggttctcagggttgttaccttctgaagatcaactctcgt
acagcagcagcaggaacagatgaacagataccggacccatggagccagtaccttaacaag
agcagtctgcaaagccaggatcagtctgaggagccagccccaacccctgtagtggtgaac
aacacggctgtagagaacaacataggaggagcacccgagatggacggagcaccagagatg
gacggacatgactcagcagagaatgacggagtctttgtaaacagtctggacaacacccac
cctctccagctggagactgccattgacatgcccggtagcctggactccctcagggccgtc
gccttggaaaccaagactacgacagtctacacaggagtggcggcgggcaccagccatggg
gcatgtcttacgctgaatgaccacaaccgcctaagactattcatccaggaatttaccttc
aggggactactacctcacatagagaagaacatcagacagctcaatgaccagctggtctcc
aggaaaggcttgagtcgctctctgttctcagtcactaagaagttgtttggaggagggaaa
gttccagagaagagtatcgctgagctgaagaacacttccggccttctctatcatccagaa
gcccctgagctgcaaatcaggaagatggctgacctgtgtttcctggttcagcactatgag
ctggcctacagctgctaccacacggccaagaaggacttcttatctgaccaggccatgctc
tatgccgctggagcgctggagatggcagcagtgtctgcgtttctccagggtggggctcca
cggccgtatccagcacactatatggacacggcaattcagacctacagagatgtgtgcaag
aacaaggtcctagctgagcgttgtgctctgttcagtgctgaggtactgaagagtcaggcc
aagtactctgatgctgctaccctcctcatcaagatgaccagtgaggattctgatctgtgt
tctgccctcctattggagcaagcagcccactgcttcattaacatgcgaaaccccatggtt
cggaagtttgccttccacatgatcctggcaggacaccgcttcagcaaggcaggacagaag
cgtcatgcgttgcggtgttactgtcaggccatgcaggtgtataagggtaaaggctggtcc
ctggctgaggaccatatcaacttcactatcggccgccagtcctttacgctgcgccaacca
gagaacgctgtcttagccttcagacacatcctcaccaacgacagccagcagaccgccaca
cagcagggagccttcctccgggagtacctctatgtctacaggaatgtgccaggggtgtgt
gaggtggcactaccccagctgcccctaccctgcatcaacagctctgctaccagggtctac
ttcggccacgaacgccgcctggcagagggtgagaagcaggctgccacccatgtgtccttg
gaccaggagtttgaccaggacctagctgccgtgtggcaggacctcgaggaacaggtggtt
gccgccgccaaccgtggggttgtcccgtcaacgttctaccctacccagtgctgcctcaac
agtcagacggacaatctccacttcccgctggctgtagtagaagaacccatcatagttgag
gtggcgttccggaaccctctaaaggttccgctggttctctcagacctctcgctgctctgg
aagttcacgctcaaagacttctctcgaccacaaccgcaggacgtcatggttggagacgct
gtcaccatcaccaatgagaaggaagccatcgctcccaggacagtgcagaaagatggcatc
atcaccacagaagtcatcccagagttcttcatgagccccgaggagacaagagtggctcgt
ctgaagctgcttcctcgccagactggtcagctcaccatcctgggtctagtctataacctg
gcctccaccccttctactggagagactactattaacagcaacagtttctcgcagaaccaa
ggtccctcagcgactgcggggacattggttcgtggtcgacaggacctagagattcaggga
ccgcggttaaaccagaccaaagaggagaagacctctgtcagccacggtcctgaccgacgt
cttgaccccaccatcacccctcccatgcccctgctggaggtattcttcctccagttccct
actgccctactatgcggtgaaatcaggaaggcctacgtagaattctgtaatgtgagtcac
gttcccctgtgcggcctgcgggtggcgtccacgcacccagacttctttaccttcggaagc
tcctccctagccacccccctcagcccctcctcctttgagaactgctctgcctacaagacc
ctggccacacccccaggagccacacccgggtcggtaaccgcggtaacgctagtgtcggcg
gctgactttgggtcgggaggaggagtagtgtctggtacggggggtaaaagggtagcagag
attcctctaggagagggaacgctaacgcctggagaatctacccagctgcccctgtggcta
agaggaccagaccaggaaggagtccatgagatcaacttcctgttctactacgagggcgcc
gagaaaggaggaaagatcagtcacagggtgctgcgtcacacagtatttatctgtgccagt
cgttctctgtcggtccgggccaccgcctgccatagtaacacactgcccgaggaggagggg
aggaatggcagcatgctggtctttgtcgatgtggagaacatcaacacaagtgaggctggg
gtgcgtgagttccacattgcacaggtctctagcagcagtaaacagtggagactacacaag
tgtataaacccagcagaaaacaaagactgcaaactcaccaccagagagaggggcaagctg
tgcttcagagcaacacgatgcaaaccccacgaagctacctcaaagtcactagagaagtac
acctttgcagacctgagccttggaaatgaacagatcatcagctccaccactccgtgtgca
gacttcttcttccggaggtgtcagccctcggaatcttggagaccgcttattgccgtggag
acacaggggagacattccaggagtcagggggcgggtcctgggggtggggctgcggatata
acaggtgtggtcaggaagtgcaacgaggtggacctcgacatcatcgtcctctggaaggca
tatgttgttgaagacaacaagcaggtgatcttggaaggacagcttcatgtggcactacag
accattggcaaagaggcctgctccctcagacagaaagaggaggctcaagagatggtgctg
ctgaagtttaaaccagagcttcctcctcctataacacggccctccatggaacagctctcc
cacctcatcaagaccaacctgcactaccccgaaagctacagccactccttcgtacagaag
agtctctgtatggttccagtcattttgactctatctaactgctccctggctcaagttgat
gccatcattgaccttcgacacaaaactaccagtcctgagtctcttgaggtgcacggttca
tttacatggctgggccagactcaatacaagctgcagttgagggcacaggaagtgatgagg
ctgccgctgagagccggcttcctgcatgcgggcgtctataacctgggaactgcacgggtc
ttcgccaagctggcggaccagggagccatgtgtgagaccagccagcagacggccacgcct
gcactaatcatcattaacagcacctga
DBGET
integrated database retrieval system
