Oncorhynchus nerka (sockeye salmon): 115108634
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Entry
115108634 CDS
T07952
Name
(RefSeq) calcium-binding mitochondrial carrier protein SCaMC-1
KO
K14684
solute carrier family 25 (mitochondrial adenine nucleotide transporter), member 23/24/25/41
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115108634
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC25: Mitochondrial carrier
115108634
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mito_carr
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
AIF-1
EF-hand_8
SPARC_Ca_bdg
EF_EFCAB10_C
Motif
Other DBs
NCBI-GeneID:
115108634
NCBI-ProteinID:
XP_029489058
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Position
LG24:complement(60093790..60105561)
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AA seq
475 aa
AA seq
DB search
MYQVVRKLVFTDSHCASDAPKTYEELFEKLDTNKDGKVDVAELKEGLSALGIAFGKGDAQ
KIVSSGDQDNDDGLDINEFSKYLKEHEKKLLLTFKSLDKNNDGRIDYMEIKQSLADLGMD
ISKEEAEKILQTIDVDGTMTVDWNEWREHFLFNTATNLQDIIRYWKHSTVLDIGDSLTIP
DEFTEEEKTTGVWWKQLAAGAMAGAVSRTGTAPLDRMKVFMQVHGSKTNKISLVGGFKQM
IKEGGVSSLWRGNGTNVLKIAPETAIKFMAYEQYKKMLSSEGGKVQTHERFIAGSLAGAT
AQTAIYPMEVMKTRLTLRKTGQYSGMFDCAKKILKKEGMKAFYKGYVPNILGIIPYAGID
LAVYESLKNAWLARYAKDTANPGILVLLACGTISSTCGQLASYPLALIRTRMQAAASIEG
SEQVTMNHLVKKILEKEGFFGLYRGILPNFMKVIPAVSISYVVYEYMRTGLGISK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagtcgtaagaaaactcgtgtttacagattcacattgtgccagtgacgctccg
aagacgtatgaagaattatttgagaaattagataccaacaaagatggaaaagtggatgtt
gcagaactcaaagagggcctctctgctttgggcattgctttcgggaaaggagacgcgcaa
aaaatagtttcatctggagaccaggacaacgacgatggtcttgatatcaatgagttctcc
aagtacctgaaggaacatgagaagaaactgctgctgacgttcaagagcctggataaaaac
aatgatggacgcattgactacatggagataaagcagtcccttgccgacctggggatggac
atcagcaaggaagaggcagagaagatccttcagaccattgatgtagatggaaccatgact
gtggactggaatgaatggagggaacacttcctcttcaacaccgccaccaacctgcaggac
attatccgctattggaagcactcaacagttctggatattggggacagcctcaccatccct
gatgagttcacagaggaggagaagacaacaggtgtgtggtggaaacagctggcagcaggc
gccatggctggggcggtctctcgtacaggcaccgcccctctggacaggatgaaggtgttc
atgcaggtgcacggctccaagaccaataagatcagtctggtggggggcttcaagcagatg
ataaaggaggggggcgtcagctccctgtggaggggcaacgggaccaatgtcctgaagatc
gcccctgagacagccatcaagttcatggcctacgaacagtataagaagatgctgtcgtca
gagggagggaaggtccagacccacgagaggttcattgctgggtcactggccggggccacg
gctcagacggccatctatcccatggaggtaatgaagactaggcttacgctgaggaagact
ggacagtactcaggaatgttcgactgtgccaagaagatcctgaagaaggagggcatgaag
gccttctataagggctacgttccaaacatcctgggcatcattccatatgctgggatagac
ctggcagtgtacgagagtctgaagaatgcgtggctggcccgttatgccaaagacacagcc
aaccctgggatcctggtgctgttggcctgtggtaccatctccagcacctgtggccagctg
gccagttatcccctggctctgatccgaaccaggatgcaggcagcagcatccatcgaaggc
tcagagcaggtgaccatgaaccatctggtgaaaaagatcttggagaaagaaggattcttt
ggactgtatcgtggaatcctgcccaacttcatgaaagtcatcccagctgtcagtatcagc
tatgtggtgtacgagtacatgaggactgggctgggcatctctaagtga
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