Oncorhynchus nerka (sockeye salmon): 115108650
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Entry
115108650 CDS
T07952
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115108650
Ion channels [BR:
one04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
115108650
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
Y_Y_Y
fn3
VWA_CoxE
Ig_J
Motif
Other DBs
NCBI-GeneID:
115108650
NCBI-ProteinID:
XP_029489090
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All DBs
Position
LG24:60783193..60795455
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AA seq
906 aa
AA seq
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MASKVAAVLLLVYLSGTFGIKLTGNGYTDILIAINPEVPEDPVLITQIEEMFKEASRHLL
NATKKHLYFKEVAILVPPNWNKGNYSKAKTEVYDKAKIIIDEPNKLHGDQPYTLQYGECG
SEGRYIHLTPDFMLNDDVSKYYGPRGKVFVHEWAHLRWGVFDEYNEEKPFYLSGSIIEAT
RCTINITGKYIHKRDQRDCTTDPVTGLYTEDCVFYPDKQQTTSASIMYNQGLSAVKEFCT
KETHNTEAPNIQNRLCDNKGVEEVITSLSVDAGVAVVPIPPSILPTFTVVQCRQRVVCLV
LDVSGSMTAGSRMLNLRQAATLFIQKIVEDQAYIGIVQFTATATIREPLTLIDGEASRDK
LVGSLPLSAGGGTDICAGVKKGLEVLGGDGDGAIGDAIILLTDGESSINCQKMVNESGAT
VHTITLGPNANIDVKELSDISGGKYHNAADGVDSNDLVDIFASHTTSDGNLTKQTIQLES
TGLNMIGWFNGSVSIDRTIGNKTSFLVIYERSPPDILVLSPFTRTYDSSHFIHDAPAKTL
TLDIEGTAETGKWKYSLLNKESTAQSMSMTVTSRAVSEAIPPVMVKTHMSQQSIDGSKPM
LVYAEVNQKGVPVILANVTATLKSDSGVQYQLQLLDNGAGADAFRNDGIYSRYFTELTTG
KYSLKVKVQNNDGMARFSLRRHSGALYIPGYVVNGQVVMNPPKPPVSEDDLQADVGSFTR
TVIGESFSVLLPPGVPPPNFPPNKITDLNAEIEEDKVLLTWTAPGEDMDQGTATAYEIRF
SEDSDLLRSNFSTAHLVTYDLSPKKAGSPEKLSFTLFSIIKNGTTLFFAAKAEDKSFLKS
ETSNIIQVTKIVPKAPVPSPTDAPDTSGSGVNITAIVISVTTVTMVACLIASVTMCSIKS
RRVNHA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagtagcagctgtgttgctgctggtttacctgtcaggtacatttgggatc
aagctgactggaaatggatacactgacattctgattgctattaaccctgaggtgcctgag
gacccagtgctcatcacacaaatcgaggaaatgtttaaagaagcctccagacatctactc
aatgcaacaaagaaacatttatatttcaaggaagtcgcaatattagtgccacctaattgg
aataaaggaaattactccaaagcaaagacggaggtctacgataaggccaaaataataatt
gatgagccaaataaattacatggagatcagccttacactctgcagtatggtgaatgtgga
tctgagggccggtacattcatttgactcctgacttcatgctgaatgatgatgtctctaaa
tactatggacccagaggtaaggtttttgtccatgaatgggcacatctaagatggggagtt
tttgatgaatataatgaagaaaaaccattctacctgtcaggttccataatcgaggcaaca
agatgtaccataaacattacaggaaagtacatccacaaacgtgaccaaagggactgcacc
actgaccctgttactgggttatacaccgaagactgtgtattctaccctgacaagcaacag
acaacctctgcatctatcatgtacaatcaaggccttagtgctgtaaaagagttctgtaca
aaagaaactcacaacactgaggctccaaacatccagaacagactgtgtgataacaaaggt
gtagaggaagttatcacttcactttctgtagatgccggtgtggcagttgtgccaatacca
ccaagtatactacccacattcactgtggtgcagtgccggcaaagggttgtctgtcttgtc
cttgatgtttcaggaagcatgactgcaggttctagaatgttgaacctgagacaagcggca
acactcttcatacagaagattgtggaagaccaagcttatattggcattgtacaatttaca
gctacggctacaattcgtgaaccattgactttaattgatggtgaagcgtcgagagataag
cttgtaggcagtctgccactatcagctggtggaggcacagacatttgtgcaggtgttaag
aaaggtctggaggtacttgggggagatggagatggtgcaataggagatgcaatcatatta
ctaactgatggggaatcaagtatcaactgtcaaaaaatggttaatgaaagtggtgcaact
gtgcacacaataactcttgggccaaatgcaaacatagatgtaaaagaattgtcagacata
tcaggtggtaaatatcacaatgctgctgatggtgtggattccaatgaccttgtggatatt
tttgcttcacacacaacatctgatggaaatctgaccaagcagacaatccagcttgagagc
actggattgaatatgattggttggtttaatggatctgtatccattgacaggacaattgga
aacaagacaagctttttagttatctatgaaagaagtccacctgacatccttgttttaagc
ccctttacacggacctatgactcatcgcatttcatacatgatgctcctgctaagacttta
acgctcgatattgaaggaactgctgagactggaaagtggaaatacagcctactaaataaa
gagtcaactgcccaatctatgtcaatgactgtgacaagtcgtgctgtcagtgaagctata
ccaccggtcatggtcaaaacccacatgagccaacagtccattgatggcagcaaacccatg
ttggtgtatgcagaggtcaaccagaaaggtgttccagtgattctggcaaatgtgacggcc
acactgaagtctgattctggggttcaatatcagctacaactgctggataatggagcaggt
gctgatgctttcagaaatgatggcatctattccagatacttcactgaactaacaacagga
aaatacagcttgaaagtgaaagtacagaacaatgatggcatggccagattctccctcagg
agacacagtggagcactttacatacctggatatgtggttaatggacaagtagtgatgaac
cccccaaagcccccagtcagtgaggatgacctgcaggctgatgtgggcagcttcaccagg
acagtcataggagagagcttctcagtccttctcccacctggtgtcccccctccaaatttc
ccccccaacaaaatcacagacctgaatgcagagatagaggaggacaaagtgctgctcacc
tggactgcacctggggaagacatggaccaaggcacagcaactgcctatgagatccgtttt
agtgaagattcggacctactcagatccaacttcagtaccgctcatcttgtcacatacgac
ctctcaccaaagaaggcaggctccccagaaaagctctctttcactctcttctcaatcatc
aaaaatggcaccactctgttctttgcagcaaaagcagaagacaaatctttcctgaaatct
gaaacatccaacattattcaagtgaccaagattgttcccaaagctcctgttccttctcca
actgatgcgcctgatacatcaggcagtggtgtgaacattactgctatagtcatatcagtc
accacagtaacaatggtggcttgtctgattgctagtgtgacaatgtgttcaattaaatca
aggcgagttaatcatgcttaa
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