Oncorhynchus nerka (sockeye salmon): 115108698
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Entry
115108698 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115108698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108698
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115108698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
C1_2
Motif
Other DBs
NCBI-GeneID:
115108698
NCBI-ProteinID:
XP_029489173
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All DBs
Position
LG24:complement(63183002..63278681)
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AA seq
1172 aa
AA seq
DB search
MTGSFNKDKQGKNREKEQQKGKERELKEKEKLHHSSSSGHNLVPGSFSSCATCSLCSKAL
QKKHGLQCLNCAVNVHKSCRTLLAECNSSKNKKDSLHRTPTTASPNLALRDRDQSSSALD
CPSGSPRIPGMTLTPRGPSAQPASAAFNSSSSSHTAAASLNHSHNSHTGSLSGDMDEPDS
LRSGLKRFNEDAVSLAPSTTDSIVVEDAYYSAFRADLESDAQDLEVESWSLAVDQHYLKK
FTKETVKRQDVIYELMQTEMHHIRTLKIMLRVYMRELKEHLQMDELFPRLESLLELHTSF
LSRLKERRRDSTQPGSDRNYNIQRLADILTTQFSGEKGDRMKENYGDFCSHHTEAVSYYK
EQLHNNKKFQNLIRKVNNLSVVRRLGVTECILLVTQRITKYPVLVERIVQNTEVGTEEHE
ELTRSLSLIKDCIVQVDAMVNLHEKASRLRDIAHKIEPKSLGKIKDGRVFHREDLSQGRR
RLLHEGAANHKAASGRLKDIVAVLLSDVLLLLQDKDQRYVFSTVDNKPSVISLQKLIVRE
VAHEERAMFLICASSNEPEMYEIHTASKEERNSWMTHIRQAVESCPHTEERLFSEQEEAR
AARFNEFQERLSQKDSQIVTLLTEKLQLFSDMCLVSGHEDTTFRSRLMLRGDASDLHQGE
TLLKGTITDVESLQNLLLSGVREPASRLEEGSGSGALPRRADTFGGYDSRPIILNKKGIV
KKKNHSRGDRARDETQKGCSDPQLTKIQASQTLEQPQADDDDDEEIASHHLSPICLTLFP
EAEFFDRVLMLSQRLYSLQAIIAKQDSHIELQRASLTERASFPGRHRGNVLLEQEKQRTL
ALQREELASFHKLQSQHRQEQARWERERERHRLQAEVTEETLRQREDDCRRLEEKLAEER
EDLERQRETYQQDLERLRESTRTVEKEKERLEQQRKIKRKTIEVMPFSGSLNGDLLLGMG
SSCSVGSDLTLPQKALVRSSPSVTPADYLERPEVLARQSANATALPVKKEVPLHLCSTTN
QQHKQVGVQQQIPTKLAALSSKSSKSAKATHRTDSTASLDMKQMLPMKLSAKEDGTLKAK
RSISPNQQLPHTLVHSQSVHLTVSSSLPDRGPENQPAGLQKPPSQASNPLHTQPQAPNPL
HTQSPNAPPAQAPVHSHSLPPPCRIPEDVIFF
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactggctcattcaacaaagacaagcagggtaagaaccgagagaaagagcagcagaag
gggaaggagagggaactcaaagagaaagagaaactgcatcacagtagtagcagtgggcat
aatttggtgccaggctccttctccagctgtgccacctgctcactgtgcagtaaggccctg
cagaaaaagcatggtctgcagtgcctgaattgtgcagtgaatgttcacaagagttgtcgg
acgctactagctgagtgtaacagcagcaagaacaagaaggattctctgcataggaccccc
acaacagcgtcgccgaacctcgccctgagggatcgggaccagtcttcttcagcccttgat
tgcccctccggttctccgcgcatcccaggcatgaccctcaccccgcggggacccagtgct
cagcctgcctcagccgccttcaacagctcttcctccagccacactgctgcagccagcctc
aaccacagccacaacagccacaccggatccctctcaggggacatggatgaaccggacagc
ctacgctccgggctcaagcgcttcaatgaggacgccgtctccctggccccatccaccact
gactccatcgttgtagaagatgcgtactactctgcatttcgagctgatctggagtctgat
gcccaggacctggaggtggagtcatggagtctggctgtggaccagcactacctgaagaaa
ttcaccaaggagacggtcaagagacaagacgttatctacgagctgatgcagacagagatg
caccacatacggaccctgaagatcatgctgcgtgtttacatgagggagctgaaggagcac
ctccagatggacgagctgttcccgcgcctggagagcctgctggagctgcacacaagcttc
ctgtcccgcctaaaagagcggcgccgagactccacgcagcccggcagcgacaggaactac
aacatacagagactcgctgacatcctcaccacacagttttcaggtgagaaaggggatcgg
atgaaggagaactatggtgatttctgcagccaccacaccgaggctgtcagctactacaag
gagcaactacacaacaacaagaagttccagaacctcatacggaaagtcaataatttgtcc
gttgtgagaagattaggagtgactgagtgtatcctcctggtgacacaacgcatcaccaag
taccctgtgctggtggaacgtattgtgcagaatacggaagtgggtacggaggaacacgag
gagttgaccaggtctcttagtctgattaaagactgcatcgtccaggtggatgccatggtc
aacctgcatgagaaggcctcgcgactccgagacatcgcccacaaaatagagcccaagtcc
ctcggcaagatcaaagatggccgtgtgttccacagagaggacctgtcccagggtcgacgc
aggctgctgcacgagggggcggccaaccacaaggccgcctccggcagactcaaagatatt
gtggctgtgctgctgtccgacgtgcttttgttactccaggacaaggaccagagatatgtt
ttctccacagtggacaacaagccctcagtgatctccctccagaagttgatagtgagggag
gtggcccacgaggagagggccatgttcctgatctgcgcctcctccaatgagccggagatg
tacgagatccacaccgcctccaaggaggagcgcaactcctggatgacacacatccggcag
gccgtagagagttgtccacacactgaggagagactcttcagtgagcaggaggaggctcga
gccgccagattcaacgagttccaagagcgtctgagccagaaggactcccagatcgtgacg
ttgctgacagagaagctgcagctgttttcagacatgtgtctggtgtctggtcacgaggac
acgaccttccgctcccgcctaatgctgcgaggtgacgcctcagacctccaccagggggag
acactgctcaaggggaccatcactgatgtggagagtcttcagaacctgttgctgtctggt
gtgagagagccagcttcacgtctagaggagggttcaggatccggggctctgcccaggaga
gcagacaccttcgggggctatgacagcaggcccatcatcctcaacaagaaaggcattgtg
aagaagaagaaccacagtagaggggacagggccagagacgagacccagaaaggctgctct
gacccccagcttacgaagatccaggctagtcagaccttggagcagccacaggctgatgat
gatgatgatgaggagatagcctcccaccacctgagccccatctgtttaacactattccct
gaggctgagttctttgaccgggtgctgatgctgtcccagagactctacagcctgcaggcc
atcatcgccaagcaggacagccacatcgagctacaacgcgcctccctcaccgagcgcgcc
tccttccctggccgtcaccgtggcaacgttctcctggagcaggagaaacagaggacgctg
gccctgcagagggaggagctggccagcttccacaagctgcagtcacagcaccgtcaggag
caggctcgctgggagagggagcgggagcgccaccggctgcaggctgaggtcacggaagag
acgctgaggcagagagaggacgactgcaggaggctggaggagaagctggcggaagagagg
gaggacctggagagacagagagagacgtaccaacaggatctggagagactgagggagtcg
acccgcacagtggagaaggagaaggaacgcctggagcagcagaggaagatcaagaggaag
accattgaggtgatgcccttctctggcagtctaaatggggatctccttctgggcatgggc
agtagctgcagcgtcggatcagacctcaccctcccccagaaggccctggttcgttccagc
ccttctgtgacgcccgcagactacctggagcgtcctgaggttctggctcgtcagagcgcc
aacgccacggcgctgccggtgaagaaggaggtgcccctccacctgtgcagcaccaccaac
cagcagcacaagcaggtgggtgtccagcagcagatccccaccaagctggcagccctgagc
tcaaagagttcgaagagtgccaaggccacccaccgcaccgacagcacagcctctctggat
atgaagcaaatgctgcctatgaagttgtcagccaaagaggacggcactctgaaagccaag
cgctccatcagccctaaccagcagcttcctcacaccctagtccactcccagtccgtgcac
ttgacagtttcatcgagccttccagacagggggccagagaaccagcccgccggcctacag
aagccccccagccaggcctccaaccccctgcacacccagccccaggctcctaaccccctc
catacccagagccctaacgcccctccagcacaggcccctgtccacagccacagcctgccc
cctccatgcaggatccctgaggatgtaatcttcttctga
DBGET
integrated database retrieval system
