Oncorhynchus nerka (sockeye salmon): 115108728
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Entry
115108728 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115108728
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115108728
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115108728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
hEGF
TB
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
115108728
NCBI-ProteinID:
XP_029489207
LinkDB
All DBs
Position
LG24:40485065..40570588
Genome browser
AA seq
2936 aa
AA seq
DB search
MQSERTCKSKHPAPHPGVHTGTGTGPQIRECNSSTKKKRHHPVVFSSRATQKHTEQLMGA
GKLARLLLGWAAVCWAAVHTAYGQAGAGDGGYQASRFTGKVDEREVQRVRRRGQETLRGP
NVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGAGAG
AGMQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVYGFT
GPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHPCRR
GFIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDIDECS
TNPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALASGRCAGDLQGQY
TKMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIDGVPHGTGNGGFPHGVFPNGGGSNG
NGYSYGYKLNPNGPNGNGHHGNGGGIGGGGQGGGGGNGFGGNGGGRNIVSLNETVDVCKH
FTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGSYHCKC
HEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTGGSFQCICNAGFELTPDGKNCIDHDE
CATTNMCLNGMCINEDGSFKCICKPGFALAPNGRYCTDIDECQTPGICMNGRCINSEGSF
RCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASPEHGFGEP
CLPCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCICNIGYE
SDSSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINECDSSP
CVNGICRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNINGATLKSEC
CSTLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVNTQGSFLC
ECAEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGIDCEEC
PKAGTPENKAICPRGPGFANRGDILTGRPFYKDVNECKVFSGLCSHGTCRNTIGSFKCRC
SSGFALNMEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMDID
ECERNTLLCQGGACLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSNNLCKNGHCVNMV
GNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPDLRT
CADIDECEDSPDICDXGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNPNICLHGD
CENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACVNVPGSFKCRCRDGWV
GDGIKCVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDECADNVNLC
ENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCVCDDG
YELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVDTRVGNCF
LDTLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPPINSTEYKTLCPGGEGFR
PNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDECTAHI
GICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMTKKM
CCCAYNVGKAWNKPCEACPTPVTSEYQVLCGNQAPGFIIDIHTGKPIDIDECREIPGICA
NGVCINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRCECSP
GFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDIDECDR
QPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALVGQVCRNGQCINSLGSFQCL
CQDGYELTPDGKNCVDINECVSLPGTCSPGTCQNLDGSFRCICPNWIRGPDDQYNAGEVE
HNICPVSTCTNHTRKLPVICQNGFAVGQWARVGSQRELRFTRFESGKLFRAPGIQPTKAK
AAASRCQARAGNPASCSHRERRGLCPRPWILPGLGKTREDMNECLDNPGVCVNGVCINTD
GSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGFECSCHEGFEPGSMMTC
EDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDHRMCRDQDECSEGLDDCESKGMS
CKNLIGTFMCICPPGMQHRPDGDGCMDLNECRAKPGVCKNGRCENTVGSYRCVCNEGFQP
SSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCNLGRGWGPQCELCPLPGTV
QYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFRCHCNVGYTTDFTSTSCID
MDECSASPKPCNFLCKNTEGSYLCSCPRGYTMQPDGKTCKDLDECSTKQHNCQFLCVNTI
GGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCVNTPGSFNCDCGKGFSLDTTGVE
CEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENECSGASVCGSASCYN
TLGSFKCLCPSGFDFEQGGGGCQDVNECSMGSNPCSFGCSNTDGGYLCGCPGGYYRAGQG
HCITGQGFQDQYSSEGDDEDSLSPEACYECKINGDVGKKGRHRRHAAGDNDLKEVSMASV
DTQESIPMNLSLASLLNKEPLLELLPALEPLEHHVRYVITHGNQGEHFRLLERHDGKSVL
RLGRKSPPPGSYRLEIASLPLFGPRRLRQLEEEHDSDYLLGEIGDALRIKLHIHLH
NT seq
8811 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcagaacggacttgtaaaagtaaacatccagccccccaccctggagtgcatact
gggactgggacaggtccacagatacgtgagtgtaactcgtcaacgaagaagaagcgacat
catccagtagtcttcagcagcagggctacgcagaaacatacagagcagctaatgggagca
gggaagctggcccggttgctgctgggatgggcggccgtttgctgggctgcggtccacaca
gcgtacggccaggcaggagcgggagatggagggtaccaagccagccgcttcacggggaag
gtggacgagagggaggtgcagagggttcgccggagaggccaggagacactcagagggccc
aatgtgtgtggctctcgcttccactcctattgttgccctggctggaagactctgcctgga
gggaaccagtgtattgtcccgatctgccgtaactcgtgcggtgatggcttctgttccaga
cccaacatgtgcacctgcggcagtggccagctctcccctagctgtggggccggagccgga
gccggaatgcagagctgtaatgtccggtgtatgaacggaggcagctgccaagaggactcc
tgctcctgtcagaaaggctacaccggcaaccactgtggacagcctgtgtgtgagaatggt
tgccagaatggcgggcgctgcattgggcccaacagatgtgcctgtgtctacggcttcact
ggcccgcagtgcgagagagactaccggactgggccctgtttcacgcaggtcaacaaccag
atgtgccagggccagttgagtggcatcgtgtgcaccaagacattgtgctgtgccaccatc
ggacgggcatggggacacccctgtgagatgtgccccgcccagcctcacccctgtcgccga
ggcttcatccccaacatccgcagcggcgcttgccaggatgtggatgagtgtcaggccatc
ccggggctgtgtgcaggaggtaactgcatcaacacagtgggctcctatgagtgtaaatgt
cccgcgggccaccgccagagtgacaccagccacaagtgtgaagatattgacgagtgcagc
actaacccaggtgtttgtgacggaggtgaatgcaccaacacagccggcagctacgtctgc
acctgtccccgtggttacatcaccagcactgacggtgccagatgtgtagaccagcgtgtg
ggcacgtgtttctcagcgttagcgagtgggcgctgtgcaggtgacctgcagggccagtat
accaagatgcagtgctgctgtgacacgggtcgctgctgggcttctggacagatccctgag
atgtgccctgtcagagggtccgatgagtacagaaggctgtgcatcgatggggttccccat
ggcacaggtaacggaggtttcccccacggagtcttccccaatggtggtggcagcaacggt
aacggttacagctacggctacaagctcaacccaaacggacctaatggcaatggtcaccat
ggcaacggaggaggaattggaggagggggacagggaggaggaggaggaaatggtttcgga
ggaaacggtggggggcgtaatatcgtatcactcaatgagaccgttgatgtgtgtaaacat
ttcaccaacctgtgtttgaacggacgctgtatccccaccccgaccagctaccgctgtgaa
tgtaacatgggctacagacaggatgtacgcggggagtgtatcgatgtagatgagtgcgtc
agcaacccctgtgtcaatggagactgtgtcaacacacctgggtcgtaccactgcaagtgt
cacgaaggctaccagggcacccccaccaaacaggcctgcattgatattgacgagtgcatc
gtgaacggagtgatgtgtcgtaacggacgttgtgtcaacactggcggaagcttccagtgc
atctgcaacgctggctttgaactcactcctgatggaaagaactgcatagatcatgatgag
tgtgccaccaccaacatgtgtctcaatgggatgtgtatcaatgaggatggtagcttcaag
tgtatctgtaaacctggctttgccctggcacctaacggacgctactgcacagacattgat
gagtgccagaccccaggcatctgtatgaacggacgctgtatcaactctgagggctccttc
cgctgtgagtgcccgccgggcctggccatcgacgtggacgggagagtgtgtgtggacaca
cacatgcgcaccacctgctacggcgccatcaagatgggcacgtgctcgcggcccttcccg
ggcgccgtcaccaagtccgagtgctgctgtgccagtcctgaacacggcttcggagagccc
tgcctgccctgccctgcccgcaactcagctgagttccaggccgtgtgcagcagtgggatt
ggcatcaccgctgacggcagagacatcaacgagtgtgccttggaccctgacatctgtcag
aacggcatgtgtgagaacctgagagggagctaccgctgcatctgtaacatcggctacgag
tccgactccagcggcaagaactgcgtggacatcaacgagtgtctcgtgaaccgtctgctg
tgtgacaacggcctgtgtagaaacacccccggcagctacacctgctcctgtcccaaaggc
ttcgtcttcaaaccagactctgagacctgcgaagatatcaacgagtgtgactccagcccg
tgtgtcaacggaatctgccgcaacatcgccgggtccttcaactgcgagtgttctcacggc
agcaagctggactccaccaacaccatctgcgtggacagcatgaaaggaacgtgctggctg
aatatccaagatggccgctgtgaggtcaacatcaacggcgccacactcaagtctgagtgc
tgctctacgctgggagccgcctggggcagtccttgtgaacgctgcgagatcgacactgcc
tgttccagggggttcgctcgtatgaagggagtcaattgtgaagacatcaatgagtgtgag
gtgttcccgggggtgtgtaccaacgggcgctgtgtcaacacccagggctccttcctctgt
gagtgtgctgagggtctcaccctggacgggagcggacgcacctgcgtggacgtgcgcagc
gagcagtgctacatgaagtggcacgaggatgagtgtggcgagccgctgcccgggcgctac
cgcgtggacatgtgctgctgctcggtgggcgcggcctggggcatcgactgtgaggagtgt
cccaaggcgggaaccccggagaacaaggccatctgcccccgaggaccaggcttcgccaac
cgaggagacatcctgactggcagacccttttacaaagatgtgaatgagtgtaaggtgttc
agcggcctgtgttctcacggaacgtgtcgcaacaccatcggcagcttcaagtgtcgctgc
agcagcggcttcgccctcaacatggaggagaggaactgcaccgatattgacgaatgtcgt
atctctccggacctgtgtggccacggcacctgtgtgaacacccccggcagcttcgagtgt
gaatgcttcgagggctacgagagcggcttcatgatgatgaagaactgcatggatattgat
gagtgtgagaggaacacactgctgtgtcaaggaggcgcctgtctgaacacagaggggagt
tacgagtgtgaatgtccccccggacaccagctgagccccgacggctcctcctgcgaagat
gtgaacgagtgccagctgagcaacaacctgtgtaagaacggccactgtgtcaacatggtg
gggaactaccagtgctcctgtgacacgggctaccaggttacaccagacagacagggctgc
gtggatattgatgagtgtaccatcatgaacggcggctgtgacacacactgtaccaactca
gagggcagctacgagtgcagctgtagtgagggctacgctctcatgcccgacctcagaacc
tgcgctgacatcgatgagtgtgaggacagccctgatatctgtgacnngggtcagtgtacc
aacgtccccggagagtaccgctgtctctgctacgacggattcatggcctccatggatatg
aggacctgcattgatgtgaacgagtgtgagctgaaccctaacatctgtctgcatggggac
tgtgagaacaccaagggatccttcatctgtcactgtcagctgggatactttgtcaagaag
ggctccaccggctgcacagatattgatgagtgtgagattggagcccataactgtgacatg
catgctgcctgcgtcaacgtccccggaagcttcaagtgtcgctgtcgtgacggctgggtg
ggggacggcatcaagtgtgtggacgtggatgagtgttccactgaggagcacaactgcaac
ctcaacgcagactgtgtcaacactccaggctcctaccgctgtgcctgcaaggagggcttc
aatggggacggcttctcctgttctgatatggatgagtgtgctgacaacgtgaacctgtgt
gagaacggccagtgtctgaacgctccgggtggctaccgttgcgagtgtgagatgggcttc
acccctactgaggacagcaaggcctgccaggatatcgacgagtgtaacttccagaacatc
tgtgtgtttggaacgtgtcagaacctcccggggatgttccggtgtgtgtgtgacgacggc
tacgagctggaccgcagcggaggaaactgcactgacattaacgaatgtgcggaccctgtg
aactgcatcaacggcttgtgtgtgaacacaccaggaagctacctgtgtaactgccctccg
gacttcgaactcaaccctactggagtgggctgtgtggacacacgagtgggcaactgtttc
ctggacacgttggcgcgtggtgacggtggcatctcctgcagcgctgagatcggcgtgggc
gtcacccgcgcctcctgctgctgctccctggggggagcctggggaaacccctgtgaactc
tgcccccccatcaactccacggagtacaagacactgtgtcccggaggagagggcttcaga
cctaaccccatcactgtcatcctggaagacattgatgagtgccaggagctgccaggcctg
tgccagggtggcaattgtgtcaacaccttcggtagcttccagtgtgagtgccccgcaggc
tactacctcaacgaggagacacgcatctgcgaggatattgatgagtgcacagcccacatt
ggaatatgtggccctggtacctgctacaacaccttggggaactacacctgcgtgtgtcct
cctgagtacatgcaggtcaacggaggaaacaactgcatggacatgaggaagagcgtgtgt
taccgcaacttcaacgacacgtgtgagaacgagctgtcgttcaacatgaccaagaagatg
tgctgctgtgcctacaacgtgggcaaagcctggaacaagccctgtgaagcctgccctacc
cctgtcacctcggagtaccaggtactgtgtgggaaccaggctcctgggttcatcatagac
atccacacgggcaagcccatcgatattgatgagtgtcgagagatcccggggatttgtgca
aacggagtgtgtatcaaccagataggaagcttccgctgtgaatgtcccatgggcttcagc
tacaacaatatactgctcatctgtgaagatattgacgagtgtaacagcggagacaacctg
tgccaacgcaacgccaactgtatcaacatcccagggagctaccgctgcgagtgctcgcca
ggcttcaagctgtcccccagtggggcctgcgtggaccgcaacgagtgccaggagatccct
aacgtgtgtagccacggagagtgtatcgacacccagggcagctaccgctgtctctgccac
aacggcttcaaggccaccgccgaccagaccatgtgcatggatatcgacgagtgtgacaga
cagccgtgtgggaacggaacctgtaagaacacagtgggctcctacaactgtctctgcttc
cctggattcgagctcacgcacaacaatgactgcatggacattgatgagtgcagtgcgttg
gtgggtcaggtgtgtaggaacggccagtgtatcaacagcctgggatccttccagtgtctc
tgtcaggatggctacgaactcaccccagacggaaagaactgtgtcgatatcaatgagtgt
gtgagtcttcctggtacctgctctcctggaacctgtcagaacctggacgggtcgttccgc
tgtatctgccccaactggatacgaggtccagacgaccaatacaacgcgggtgaggtggag
cacaatatctgcccagtgagcacgtgcaccaaccacaccaggaagcttccagtgatctgc
cagaatggctttgctgtcggacaatgggcgcgtgttggatcccagagagagcttcgtttc
acccgctttgagtccggcaagttgtttcgtgccccaggcattcaacccaccaaggccaag
gctgctgcaagccgatgccaggcgagggcggggaacccggcgagctgttcccaccgagag
cggaggggcctgtgccctcggccatggatcctgcctggacttgggaaaacccgtgaggac
atgaacgagtgtctggacaacccaggcgtctgtgtgaacggtgtctgtatcaacacggac
ggatcgttccgctgcgagtgtccctttggctacaacctggactataccggggtcaactgt
gttgacacggatgagtgctctataggaaacccctgtggtaacgggacctgtactaatgtg
gtgggaggctttgagtgctcctgtcatgaaggcttcgaacctggctccatgatgacctgt
gaagatatcaacgagtgctctctgaaccccctgctgtgtgccttccgctgtgtcaatact
tttggttcctacgagtgcatgtgtccctcgggctacgtgctgcgagacgaccaccgcatg
tgcagagaccaggatgagtgttcggaggggctggatgactgtgagtccaagggcatgtcc
tgtaagaacctgattggcactttcatgtgtatctgcccccctggcatgcagcacagacct
gacggagatggctgcatggacctgaatgagtgtcgcgcgaagcctggcgtctgtaagaac
gggcgctgtgagaacacagtgggcagctaccgctgtgtgtgcaacgagggcttccagccc
agctccaccggaacggactgtatcgataaccgacagggcttctgtttcaccgaggtgctc
cagactatgtgtcagcagggctccaccaacaggaacagtgtcaccaaatcggagtgctgc
tgcaatcttgggcgcggctggggaccccagtgtgagctctgcccactgcctggcaccgtg
cagtacaagaggatgtgcccactgggacccgggtacaccaccgacggcagagacatcaat
gagtgtacggtgatgccagacctgtgtaagaacggccagtgcatcaacaccatcggatcg
ttccgctgccactgcaacgtgggttataccaccgacttcaccagcacctcctgcattgat
atggatgagtgttccgcgtctcccaagccctgtaacttcctgtgtaagaacacagagggc
agctacctgtgctcctgccccagaggatacactatgcagcctgacggaaagacctgcaaa
gatctggatgagtgttccaccaagcagcacaactgtcagttcctgtgtgtcaacaccatc
ggcggtttcacctgcaagtgtcctgcaggcttcacccagcaccaaaccgcctgcatcgac
aacaatgagtgtaatgggcagaacagtgtgtgtggctccagggcttcctgtgtcaacact
cccggcagcttcaactgtgactgtgggaaaggcttctctctggacaccactggcgtggag
tgtgaagacgtggatgagtgtggcagtaaccatcgctgtcagcacggctgtcagaacatg
atgggaggtttccgctgtggctgtcctcagggatatgtacaacactaccagtggaaccag
tgtgtggatgagaatgagtgttcgggtgcgtctgtgtgtggctcggcctcctgctacaac
accctgggcagctttaagtgtttgtgtccgtccggctttgactttgaacagggagggggc
ggctgccaggatgtcaatgagtgttccatgggcagtaacccctgcagcttcggctgctcc
aacacagacggaggatacctgtgtggctgtcctggaggttactacagggctggacagggt
cattgtataacgggccagggcttccaggatcagtatagctcagagggagacgatgaggac
agtctgtctccagaggcctgctacgaatgtaagatcaacggagacgtcggcaagaaggga
cgacacagacgtcacgctgctggggacaacgacctcaaggaggtgagcatggccagcgtg
gacacccaggagtccatccccatgaacctgagcctggcctcgctgctcaacaaggagccc
ctgctggagctgctgccggccctggagccgctggagcaccatgtgcgctacgtcatcacc
cacggcaaccagggcgagcactttcgcctgctggagcgccacgacgggaagagcgtgctg
aggttgggcaggaagtcgcctccccctggctcctaccgcctggagatcgctagtctgccc
ctgttcgggccgcggcgcctccgacagctggaggaggaacacgacagcgactacctgctg
ggagagataggagacgccctgcgcatcaagctgcacatccacctgcactga
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integrated database retrieval system
