Oncorhynchus nerka (sockeye salmon): 115108731
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Entry
115108731 CDS
T07952
Name
(RefSeq) protein unc-13 homolog A-like
KO
K15293
protein unc-13 A/B/C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108731
Membrane trafficking [BR:
one04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
115108731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
115108731
NCBI-ProteinID:
XP_029489211
LinkDB
All DBs
Position
LG24:42806599..42861613
Genome browser
AA seq
1825 aa
AA seq
DB search
MSLLCVGVKKAKLDGPQEKFNTYVTLKVQNVKSTTIAVRGAQPCWEQDFMFEINRLDLGL
TVEVWNKGLIWDTMVGTLWIPLQNIRQSNEDGPGQWLTLDSQVIMAENEITGTKDPTFHR
VLLDTRFELPLDIPEDEARYWAKKLEQLNAMRDQDYTYQEEEERPLQAPSTQCCNWSLWG
DQQNEDPDSAVDDRDSDYRSETSNSIPPPFYTTSQPNASMHQYPIQRDLRYSSHTSYNGS
IQELDYDNQRPMSPTGSSRYASSGELSRGSSQLSEEFGPENEGSLRGSVELYDENDSYHS
CHSSVSYDKESAGWDPDEPEVVYSDEGGYVKDGGEEGAIYDEEGELYQPEQGEGEYNYEG
EEEIIYEDEDLYPLDGTLSEDQEPPYTPTPTSTAPTLAPEASITRPPLEKQASLREQQPE
PPTLAPTTQAQTMPPVQPPVTTASTKPPFTPMIHPSLTQPPVPTAQPPVPTAQPPVPTTQ
PPAPETQPPVSDALDDILLDLQEEEPLSLEQEVLVVESPPAEVPAEKSETPLVSYQRPIM
EPGPDRARANWQRLCSKVRLQLQQARGESVGICSLLLSAGVGGALYSIDSMPDLRKRKAM
PLVRDLVSAMSLAQNSRKAGITSAMASSTLNNEELKSHVYKKTLQALIYPISCTTPHNFE
VWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHDKCQDLLNADCLQRAAEKSSKHGAE
DRTQNIIMVLKDRMKIRERNKPEIFELIQEVFAMVKATHVTYMKQIKQSVLDGTSKWSAK
ISITVLCAQGLQAKDKTGTSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDR
IKVRVWDEDDDIKSRVKQKFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGA
IRMHINVEIKGEETVAPYHVQYTCLHENLFHFVTDVQSSGVVKIPDAKGDDAWKVYFDET
PQEIVDEFAMRYGVESIYQAMTHFACLSSKYMCPGVPAVMSTLLANINAYYAHTTQATNN
VSASDRFAASNFGKERFVKLLDQLHNSLRIDLSMYRNNFPASSSERLQDLKSTVDLLTSI
TFFRMKVQELQSPPRASQVVKDCVKACLNSTYEYIFNNCHELYSREYQTDPAKPGVDHPE
EQGPSIKNLDFWSKLITLIVSIIEEDKNSYTPCLNQFPQELNVGKISAEVMWNLFAQDMK
YAMEEHEKNRLCKSADYMNLHFKVKWLYNEYCKDLPFFKSRVPEYPAWFEPFVIQWLDEN
EEVSRDFLHGALERDKKDGVNFSTSSPQNASAESHWLFAKARDHPSLPRQFPGNVGTGLC
SPALVTFRSAQPRFEIIQQAECPTRITIGNVLLSYADIISKCFANYVNMEKVPCILINNI
QQLRVQLERMFEAMGGKDLCKEASDFLKDLQVKLNTVMDDLSRIFSVSFQPQIEDNVKQM
GDILGQVKGTNVGANNCSSVAQDADNVLQPIMDFLDSNLTLFAKICEKTVLKRVLKELWK
LVMNTMEKTIVLPPLTDQTMIGRVKLACHSDGTQLISNAAKQLGQLSKIKEHMGREEAKA
LSPKQCAVIELALDTIKQYFHAGGVGLKKTFLEKSPDLLSLHYALSLYTQATDKLIKTFV
SSQNAQVFGGKGVRFTASEDVYPEKGSGVDDAVGEVSIHVEIFTHPNTGEHKVTVKVVAA
NDLRWQTTGVFRPFVEIYIIGPHLADKKRKYATKSKNNSYAPKYNETFTYTLSNEVGTEC
YELQVCVKDYCFAREDRTVGMAVMQLKDMSSRGSVACWLPLGKRVHMDETGLTVLRILSQ
RNNDDVAKEFVKLKSDQRSPEEGRG
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgctgtgcgttggcgtgaagaaagccaaactcgatggaccccaagagaaattt
aacacctacgtaacgctgaaggtgcagaatgtcaagagcaccaccattgctgtgcggggc
gcccagccatgctgggagcaggacttcatgtttgagatcaacaggctggacctggggctg
acggtagaggtgtggaacaaagggttaatctgggacaccatggtggggaccttgtggatc
cccctgcaaaacatccgccagtctaatgaggacgggccggggcagtggctgaccctggac
tcccaggtcatcatggctgagaatgagatcaccggcaccaaagaccccaccttccaccgc
gtgctgctggacacccgctttgaactgccattagacattccagaggatgaggctcgatac
tgggccaagaaactggagcaactcaatgccatgagggaccaggactacacataccaggag
gaggaggagagaccactgcaagcgccatcaactcagtgctgtaactggagtctttgggga
gaccagcaaaatgaagacccagacagtgcggtggacgacagagacagcgactaccgcagt
gagaccagtaacagcatcccccctcccttctacaccacgtctcagcccaacgcctccatg
caccagtaccccatccagagagacctgcgctactcctcgcacacctcctacaacggctcc
atccaagagctggactacgacaaccagagacccatgagtcctacaggcagcagtcgctat
gcctcctctggggagctgagtcgaggcagctcccagctcagtgaggagtttggccctgag
aacgaggggagtctgagaggctctgtggagctctacgatgagaacgactcttaccactcc
tgccactcctctgtcagctacgacaaggaatcggctggctgggaccccgatgagcccgag
gtggtttacagtgacgaagggggctatgtcaaagatggcggagaggagggggctatttac
gatgaggagggcgagctctaccaacccgagcagggagagggggagtacaactatgaggga
gaggaggagataatttacgaagatgaagatctctaccctctggacggcacgctcagcgag
gaccaggagccaccctacacccccacccccaccagcacagcccccacgctggcccccgag
gcctccatcaccaggccccctctggagaaacaagcctctctgagagagcagcagcccgag
ccccccaccctggcccccaccacccaggcccagaccatgccccctgtccagccccctgtc
accacagcctccaccaagcctccatttacccccatgatccatccatccctcacccagccc
ccggtgcccaccgcccagcccccggtgcccaccgcccagcccccggtgcccaccacccag
ccccctgctccagagacccagcctccagtgtctgatgccctggatgatatcctcctagac
cttcaagaggaagagcctctgtctttagagcaggaggtccttgtggtggagagtccccca
gcagaagtcccagcagagaagagtgagactcctcttgtcagctatcaaaggcccatcatg
gagcctggaccagacagggccagggccaactggcaacggctctgcagcaaggtccgacta
cagctgcagcaggctcgaggggagtcggttgggatttgctccctgttgctatcagcaggg
gtgggtggggcgctgtatagcattgacagcatgccggacctccgcaagaggaaagccatg
cctctggtcagggacctggtcagtgctatgtccctggctcagaactccaggaaggcaggg
attacatcagccatggcgtccagcactctcaataacgaggaactgaagagtcatgtgtac
aagaagactctacaggctctgatctaccccatctcctgcaccacgccccataactttgag
gtgtggacggccaccacgcccacctactgctatgagtgtgaggggctgctgtggggtatc
gcccgccagggcatgaggtgcaccgagtgtggggtcaaatgtcacgataagtgccaggac
ctgctcaacgctgactgcctgcaaagggcagcggagaagagttctaagcatggggcggag
gaccgaacccagaacatcatcatggttctgaaggacaggatgaagatccgggagaggaac
aagccggagatctttgagctgatccaggaggtgtttgccatggtcaaagccactcacgtc
acctacatgaagcagatcaaacagagcgtactggacggcacctccaagtggtcggccaag
atcagcatcacagtgctgtgtgcccagggccttcaggccaaggataaaactggcacgagt
gacccttatgtcacggtccaggtgggcaagaccaagaagaggaccaagactatctacggc
aacctcaaccctgtctgggaggagaacttccactttgagtgccacaactcctcggaccgg
atcaaggtgcgggtgtgggacgaggatgatgacatcaagtctcgggtgaaacagaagttc
aagagggagtctgatgacttcctgggtcagaccatcattgaggtccgcacgctgagcgga
gagatggacgtctggtacaacctggacaagcgtacagacaagtcagctgtgtctggtgcc
atcaggatgcacatcaatgtagaaatcaaaggagaggaaacagtcgctccatatcatgtc
caatacacctgtctgcacgagaacctcttccactttgtcacagatgtgcagagctctggc
gttgtgaagattcctgacgctaaaggggatgatgcatggaaggtgtactttgatgagact
cctcaggagatagtggatgagtttgccatgcgctacggagtggaatccatctaccaggct
atgactcactttgcctgcctgtcgtctaagtacatgtgcccgggggttcccgcggtaatg
agtaccctgctggccaacatcaatgcctactacgcccacaccacccaggccaccaacaac
gtgtcggcctccgaccgcttcgccgcatccaacttcgggaaagaacgttttgtgaagctc
ctggaccaactccacaactctctgaggattgatctgtccatgtaccggaataacttccca
gccagcagttctgagaggctgcaggacctcaagtctactgtggacctgctcaccagcatc
accttcttcaggatgaaggtacaggagctacagagtccccccagagccagtcaggtggtg
aaggactgtgtcaaagcctgtctcaactccacctatgaatacatcttcaacaactgtcac
gagctctacagccgggagtaccagacagatccggccaagccaggagtggatcacccagag
gagcagggtcccagcatcaagaacctggacttctggtccaaactcatcaccctcatcgtg
tccatcatagaagaggacaagaactcctacacaccctgcctcaaccagtttcctcaggag
ctcaacgtgggtaaaatcagtgccgaggtgatgtggaacctgtttgctcaggatatgaag
tacgccatggaggagcatgaaaagaaccggctgtgtaagagtgcggattacatgaacctg
cattttaaagtcaagtggctttacaacgagtactgcaaagacctgcccttcttcaagagc
cgtgtgcccgagtacccggcgtggtttgagccgtttgtcatccagtggttggacgagaat
gaggaagtgtctcgagacttcctgcacggtgcgctggagagggacaaaaaagacggggta
aacttttccacttcttctcctcaaaatgcaagtgctgagtcacattggttgttcgctaag
gcgcgcgatcatccctctcttccccgccagttcccaggtaacgtcggaacaggcctctgt
tctcctgctctggtgacgtttcgctcagctcaaccgaggttcgagataatccagcaagcg
gagtgtcccacccggatcaccatcggtaacgttctcctgtcctacgctgacatcatctcc
aagtgctttgctaactacgtcaacatggagaaagtgccatgcatcctgatcaacaacatc
cagcagctcagagttcaactggagaggatgtttgaggccatgggaggaaaggacctgtgc
aaagaggccagtgacttcctgaaagacctgcaggtgaagctgaatactgtgatggatgat
ctcagcaggatcttttctgtcagtttccagccgcagattgaggacaacgtgaaacagatg
ggagacatccttggccaggtgaaggggaccaacgtgggggctaacaactgcagtagcgtg
gcccaggacgctgacaatgtgctgcagcccatcatggacttcctggacagcaacctgacg
ctgtttgctaagatctgtgagaagacggtgctgaaacgtgttctgaaggagctgtggaaa
ctggtgatgaacaccatggagaagactatcgtcctaccccctctcaccgaccagacgatg
attgggagggtgaagcttgcttgtcacagtgatggcactcagctcatctccaacgctgcc
aaacagctgggacagctctccaagataaaggagcacatgggtcgtgaggaggccaaggca
ctgtcccctaagcagtgtgctgtgatagaactggctctggacaccatcaagcaatacttc
catgctggaggggtgggtctgaaaaagaccttcctggagaagagtcctgacctgttgtct
ctacactacgccctgtccctctacacccaggccacagacaaactcatcaagacctttgtt
tcatctcagaacgcacaagttttcggcgggaagggggtgaggttcacggctagtgaggat
gtgtacccagagaagggctctggagtggacgacgccgtgggagaggtgtctatccacgtg
gagatcttcacccaccccaacactggagagcacaaggtcaccgttaaagtggtggcagcc
aatgacctgaggtggcagaccacgggggtgttccgtcccttcgtggagatctacatcatc
ggtcctcacctggctgacaagaagaggaagtacgccaccaagtccaagaacaacagctac
gcccccaaatacaacgaaacgttcacatacaccctcagtaacgaggtgggcacagagtgt
tacgagctgcaggtgtgtgtgaaggactactgcttcgcccgggaggaccgtacggtgggc
atggccgtgatgcagttgaaggacatgtcctctaggggcagtgtggcgtgctggctcccc
ctggggaaacgcgtgcacatggacgagacgggcctcactgtcctccgaatcctgtcccag
cgcaacaacgacgacgtggcaaaggagttcgtcaagctcaagtcagaccagcgttctccc
gaggaaggccgaggctga
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integrated database retrieval system