Oncorhynchus nerka (sockeye salmon): 115108772
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Entry
115108772 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated chloride channel regulator 3A-1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115108772
Ion channels [BR:
one04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
115108772
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Motif
Pfam:
CLCA
VWA
VWA_2
Ig_CYK3_C
DUF1285_N
Motif
Other DBs
NCBI-GeneID:
115108772
NCBI-ProteinID:
XP_029489244
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Position
LG24:60805357..60829716
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AA seq
781 aa
AA seq
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MASEAVAVLLLVFLSGSTFGIKLEGNGYTDVLIAINPVVPENPLLIERIKEMVSNASSVL
YXATEDKLYCEEITILVPPNWSQGDYGRTKTETYEKAKIIINEENRAYGDQPYTLQYGQC
GSESRYIHLTTKFILDDELIKLYGPRGKVLVHEWAHLRWGVYDEFDDGQPFYKGAHSDIQ
VARFCSKKTHNSEAPNAQNRMCDNRDVMDVIFTSSVDAKANVQHLKGPYPAPRFTVIQRG
QRVVCLVLDVSGSMRGARILQQQQAASLFLTTIVEDHSYVGIELRKDNGNTLGDEIILLT
DGESELDCASEVKESGAIVNTIALGPSANKELKMLSEISGGKYFYASDNLDQTELVNVFA
SLITTNGDLTHQTILFDSSGMKGNGILNGTVSVDHTVGNKTTFLVLYESQSPEDIEIKSP
SGQIYDLIDFQHSSISKTHSLVIQGTAETGDWTYTIKNILSDQYITITSCAVSDAIPPVT
AKAHMSQQSIDGSKPMLVYAEVNQKGDPVILADVMATLMSDSGDQYQLQLLDNGAGADVF
RNDGIYSRYFTTSKNGRHNLKVKVQRKDKGKNNGQVKLKRHSVAPYVPGYVIKGKVVMNP
PKPPVSEDDLQADVGSFTRTVIGESFSVLLTWWPPPNFPPNKITDLNAEIEEDKVMLTWT
SPGEDMDTGTANSYEIRVSMDLEALRGNFSGAHLMNTSDIRPLEAGSTEEYSFLSSYINN
AELETVMFFAEDRRRFHFVHHLWPQRTHCRSVPGWTFWESKQQHSGITPDVSQFTLWIVD
H
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaagcagtggctgtgttgctgctggtcttcttgtcaggatctacctttggg
ataaagctggaaggaaatggatacacagacgttctgattgctattaacccagtggtacct
gagaacccactgctcatcgagagaatcaaggaaatggtgagcaatgcgtcatccgtactc
tacnnagccactgaggacaaattgtactgtgaagagataacaatactagtgccaccaaac
tggtctcaaggagactatggaagaacaaagactgaaacctatgaaaaagccaaaataatc
attaatgaggaaaatcgtgcatatggagatcaaccttacaccctgcagtatggtcaatgt
ggatctgagagccggtacattcatttgaccactaaattcatcttagatgatgaactcatt
aaactgtatggacccagaggtaaagtccttgtgcatgaatgggctcacctgagatgggga
gtttatgatgagtttgatgacggtcagccattctacaagggtgcacacagtgatattcag
gttgcaagattctgctccaaaaaaacacacaacagtgaggcccctaatgcacagaacaga
atgtgtgacaacagagatgttatggacgttattttcacaagctcagtggatgccaaagcc
aatgtccagcatctgaaaggaccatatccagcacctaggttcactgtgatacagagggga
cagagagttgtctgtctggtccttgatgtttcaggaagcatgcggggcgcaagaatattg
caacagcaacaagcagcatctctgttcctgacaactatagtagaagatcattcatatgtt
gggattgagttacgcaaagacaatggcaatacattgggagatgaaatcatccttttaact
gatggggaatcagaattagattgtgcatctgaggttaaagaaagtggtgccattgtaaat
acaattgctcttggaccaagtgcaaacaaagagttgaaaatgttgtcagaaatatcaggt
gggaaatatttctatgcatctgataatctggatcaaactgaacttgtgaatgtctttgct
tcacttatcacaaccaacggcgatttgacacatcagacaatcttgtttgatagttctgga
atgaaaggaaatggaattctcaacgggactgtgtctgttgatcacacagttgggaataaa
accacctttttggtgttatatgaaagtcagtccccggaggatattgaaataaaaagccca
tctggacaaatctacgatttgattgattttcaacattcttctatttccaaaacgcactcc
ttagttattcaaggaactgctgagactggagattggacatataccataaaaaatatactg
tcagatcagtatataacaataacaagttgtgctgtcagtgatgccatacctccagtcacg
gccaaggctcacatgagccaacagtccattgatggcagcaaacccatgttggtgtatgca
gaggtcaaccagaaaggtgatccagtgattctggcagatgtgatggccacactgatgtct
gattctggggaccaatatcagctacaactgctggataatggagcaggtgctgatgttttc
agaaatgatgggatctattccagatattttaccacttctaaaaatggaagacacaacttg
aaagtgaaagtgcagagaaaagacaaaggcaaaaataatggacaagttaaattgaagaga
cacagtgttgccccatatgtacctggttatgtcatcaaaggaaaagtagtgatgaacccc
ccaaagcccccagtcagtgaggatgacctgcaggctgatgtgggcagcttcaccaggaca
gtcataggagagagcttctcagtccttctcacctggtggccccctccaaatttccccccc
aacaaaatcacagacctgaatgcagaaatagaggaggacaaagtgatgctcacatggacg
tcacctggggaagacatggatactggcacagctaattcctatgagatcagagtcagcatg
gacttggaagccctgagaggaaatttcagtggagcacatctaatgaacacctccgacatc
cgaccactagaggcaggctctacagaggaatactccttcctttccagttacatcaacaat
gctgaactagagacggtcatgttctttgctgaagaccggaggaggttccatttcgtgcac
catctgtggccacagaggacacactgccggtcagtgccgggttggaccttctgggagtcg
aagcagcagcactctggcatcactccagacgtttcccagttcacgctctggatagtcgac
cattga
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