Oncorhynchus nerka (sockeye salmon): 115108858
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Entry
115108858 CDS
T07952
Symbol
tdrd5
Name
(RefSeq) tudor domain-containing protein 5 isoform X1
KO
K18407
tudor domain-containing protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115108858 (tdrd5)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115108858 (tdrd5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
Motif
Other DBs
NCBI-GeneID:
115108858
NCBI-ProteinID:
XP_029489279
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All DBs
Position
LG25:4837351..4872442
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AA seq
950 aa
AA seq
DB search
MTQEQLLSSLKKDVRSLLISAKQGLTPDQLKRDYINMLGHPMPLRILGFRNVLDMIREIP
DVVHILYLGDGSIVLKAVADDATRGIVELVAKQRSAKKTPAQRGGVGFFSPRYQHHNPMV
LPRRGRAPPALPAQLRAQLHQLLSHGAVGLSELETAFVRRFGFPLRVNNYGFYSIAEMLA
AAADLVAVTQSRMGSQLSLRGAVVASRRTGPIKPLFPLKQTFKTVPILRQMTQTNSVPVE
RHTMESSTPNPVSNTPNLVVPAPLPEAAVLNSPEGDQGSLPMDYTTPQPEPEPTQDGQLF
QKCVIKLEEELRQRILENGEAGTVSPELKAKLRQVVAQNSEGLSVHDLPAEFKRVFGEEL
PVVQSGFLSTTEMVGALSDTLYLRPMAGDEGNHWVVMDIQNAPGHTTLQQPGTAEPEGPV
EGVKALNPSGTGYYFSCEESPWEGEGGETKPNLEEDLELRITTKTFYQMVDMYGSLPVRC
RRGVVIPPDAMRGQRLRAPTCRGPRELVAVLVEHVESPSNFYIRFDESQEARALENMMIE
MRSCYTCPEVLERYRLPERYVRTGQVCCVAPQGIWFYRVVVHRVLNNTHAEVYYVDFGDL
TTVQRSSLNFLKSCYSELPAQAVPSSLAGIKPFGGSWSANAKTSFQKLCCDRTLVAALHG
YHADFLQLFLCDTHTEEDVYIHSALQAQGHGLCCAPTVSAALCNQFNPVSLYLGEGVFGE
GMEIEDEDPTLEPCHEATTITFQHNTTQPLSKSSPCPTHTTPNLVGGNKTKEEEVLPDLP
ALEFIEVNSTAQGGLNANPFAALQSKDPLLLCCSDWDQGWTPNAPAPEVVQPKANLGNHG
DTAMPPPPSPSASELKQPCSVNGGAVSLIPAVPPQPSTLKTLSLRTPGLTQTQSAPYSTV
NKYTHGMSMFPLFGTGDTLRVTSPFALGPAARLATGTGFHLLNWYPHKMA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggagcagttgctttcgagcctgaagaaggatgtgcgctccctgctcatctca
gccaagcagggcctgaccccagatcagttgaagagggactacatcaacatgctgggccac
cccatgcccctgaggatccttggcttccgcaacgtgctggacatgatccgcgagatcccc
gacgtggtgcatatcctctatctgggagatggcagcatagtgctgaaggcagtggctgat
gacgccaccagaggcatagtggagttggtggccaagcagcgcagtgccaagaagacccct
gctcagcgtggcggtgtgggcttcttctcgccacgctaccagcatcacaaccccatggtc
ctgccgcggcgtggtcgtgcacccccggccctgccggctcaactccgggcccagctccac
cagctgctctcccatggggccgtgggtttatcggagctggagacagcattcgtccgccgc
ttcggcttccctttacgtgtcaacaactacggcttctattccatcgccgagatgctggcg
gcggccgccgacctggtggcagtcacacaaagcaggatgggctcccagctgtccctcagg
ggggcagtggtggcatcacggaggaccggacccataaagccgttattcccattgaagcag
accttcaaaactgttcctatcttaaggcagatgacccagacaaactcagtcccagtagaa
agacacaccatggagtccagtactccgaatccagtgtccaatactccgaatcttgtggta
ccagcgccactccctgaggctgcagtccttaatagcccagagggggaccagggctctctg
ccaatggattacacaacaccacagcctgaacctgaacccacgcaggacggacaactcttt
cagaagtgtgtcatcaagctggaggaggagcttaggcagcgtattctggagaacggggaa
gcgggcactgtcagtccagaactaaaggccaagcttcgccaggttgtagcccaaaacagt
gagggactgtccgtccacgatctccctgcagaattcaagagggtgtttggggaggagctg
ccggtggtccagagtggcttcctgagtaccacggagatggtgggtgccctgagcgacacg
ctctacctgcggcccatggcgggcgacgagggcaaccactgggtggtcatggacatccag
aatgcccctggacacacaacgcttcaacaaccaggaacggcggagcccgaaggccccgtt
gagggtgtcaaggctctgaacccgtcaggtacgggctactatttcagctgtgaggagtca
ccttgggagggagagggaggcgagaccaagcccaacttggaggaagacctggagctccgc
atcaccaccaagaccttctaccagatggtggatatgtacggctcgttgccagtgcgttgt
cggcgtggggtggtgattcccccggacgccatgcggggccagaggctgagggcccccacg
tgcaggggccctcgggagctggtggccgtgctggtggagcatgtggagtctccctcaaac
ttctacatccgctttgatgagagccaggaggcccgcgccctggagaacatgatgattgag
atgaggagctgctacacctgtcccgaggtgttggagcgttaccgtctaccggagcgctac
gtgcgtacaggccaggtgtgctgcgtggcgccccagggcatctggttctaccgcgtggtg
gttcaccgtgtcctcaacaacacccatgcagaggtctactacgtggactttggagacctc
accactgtccagaggagcagcctcaacttcctcaagtcttgttactcagagctcccagca
caagcagtcccgtcatcgctggctggaatcaagcctttcggtggcagctggagtgccaac
gccaagacctccttccagaagctatgttgtgaccgtaccctggtggcagccctgcatggc
taccacgccgacttcctgcagctctttctgtgcgacacacacaccgaggaggacgtgtac
atccacagcgccctgcaggcccagggccatgggctctgctgcgcacccaccgtcagcgca
gcgttgtgtaaccagttcaacccagtgagcctctatctgggcgaaggcgtgttcggcgag
ggaatggaaatagaggacgaggaccccaccctggagccttgccacgaagccaccaccatc
actttccagcacaacaccacccaacccctgtccaagagctccccttgccccactcacacg
acccctaacctcgtgggtgggaacaaaaccaaggaagaggaagttcttcctgacctccca
gcactggagttcattgaggtcaactctacagctcaggggggcctgaatgccaacccgttt
gcagctctgcagagtaaggacccgttgctgctgtgctgtagtgactgggaccagggctgg
acacccaatgcccctgccccagaggtggtacagcccaaggcaaacctgggtaaccatgga
gacacagctatgcccccccccccttcacctagtgccagtgagctgaagcagccatgctct
gtaaatggaggggcggtgtccctcatacctgcggtgcccccccagccctccactctgaaa
accctgagcctccgtacccccggattgacgcagacccagagtgccccatacagtacggtt
aacaaatacacacacggtatgtccatgttccctctgtttgggacgggggacacgctgcgt
gtcacctcgccctttgccctgggcccggccgcccgtctggctaccggaactggtttccac
ctcctcaactggtaccctcacaaaatggcctga
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