Oncorhynchus nerka (sockeye salmon): 115108966
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Entry
115108966 CDS
T07952
Name
(RefSeq) carbohydrate sulfotransferase 1-like
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
115108966
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115108966
Enzymes [BR:
one01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
115108966
Glycosyltransferases [BR:
one01003
]
Unclassified
Sulfotransferases
115108966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
115108966
NCBI-ProteinID:
XP_029489375
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Position
LG25:complement(31296111..31315802)
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AA seq
438 aa
AA seq
DB search
MHVGCRGGGGGRMECSWKTVLLLVCASLGVQYTAIRTLRDSLSGPCHGGVYHCQSRQPKD
SRWRALCDDSMLPMEMSAAASRRHILLFTTTRSGSSFTGQLFNQHPGIFYVFEPLYHVQQ
AFTNSSSRLRRALDRRALLGAYRDLLLNLYTCDLRFLENYIRPEPQEHITGSFFRRSSSR
ALCSNPVCPEGGEGASGGQPDETWCPKKCGALNLTLASMACLSRGHVAIKTVRVPEVGDL
RTLTEDPRLDLRIVHLVRDPRAILASRMMAFSEQFRAWKIWNATGRKPRYVDLSQITSTC
RDMAESAETGLQRPAWLRGRYLLVRYEDLALNPAEKARELYKFVGLEMDENVRSWIAQNT
NNSVPSTSEWNYKYSTTRDSKATAESWRLRLGFDIVRTLQTLCNDTLSLLGYRVVHSVAD
LRNMSNSLVEPRTFQTFL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaggatgtaggggcggaggaggaggcaggatggagtgctcctggaagacagtg
ctgttgctggtgtgtgcctctctgggggtccagtacacagccatccgcaccctgagggac
tccctgtctgggccctgccacggtggcgtctaccactgccagagccgacagcccaaagac
tccaggtggagagctctgtgtgacgacagcatgttgcccatggagatgtcggccgcggcc
tcccggcgccacatcctcctgttcaccaccacacgcagcggctcctccttcactggccag
ctcttcaaccagcaccctggaatcttctatgtgttcgagcccctttaccacgtccaacag
gccttcaccaactccagcagtaggctgcgtcgagccctggaccgccgggccctgctgggg
gcctaccgggacctcctccttaacctctacacctgcgacctgcgcttcctggagaactac
atccgccctgagccccaggaacacatcactgggtccttctttcgccgtagctccagccga
gcactctgctccaaccctgtgtgccccgagggtggggagggggcctctgggggtcagcct
gatgagacctggtgccccaagaagtgtggtgcgctgaacctcaccctggcctccatggca
tgtctgtcgcggggtcacgtggccatcaagacagttcgtgttccggaggtgggggacctg
cgtaccctgaccgaggacccacggctggacttgaggatcgtacacttggtgcgtgatccc
agagccatcctggcctcacggatgatggccttctctgagcagttccgcgcctggaagatc
tggaatgctacaggcaggaagccacgctacgtggacctatcgcagatcaccagcacctgt
agggacatggcggagtcggcagagacggggctgcagagaccggcatggctgcgtggacgc
tacctcctggtccgctacgaggacctggccctcaacccagcggagaaggcccgggagcta
tacaagtttgtgggactggagatggacgagaacgtgcgctcgtggatcgcacagaacacc
aacaacagcgtgccttctacatccgagtggaactataagtattccaccaccagagactcc
aaagccacagcggagagctggaggctaagactagggtttgatatagtgaggactttgcag
acgctctgcaatgatacactctctcttctaggctacagggtggtccactctgtggctgat
ctcagaaacatgtcgaatagtttggtggagcccaggacatttcagactttcctataa
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