Oncorhynchus nerka (sockeye salmon): 115108981
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Entry
115108981 CDS
T07952
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115108981
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115108981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
115108981
NCBI-ProteinID:
XP_029489389
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All DBs
Position
LG25:complement(37217703..37221092)
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AA seq
450 aa
AA seq
DB search
MAYPQGFLFQPSVSLALHSCPPFSSSVILGGPRTEELGRSSSGSAFAPYAGSPAFNGSSP
GFNSHLQYSGEQTAALNSFVGSAYDPSAGIAGSLEYHPFGVALGYPYGDPAYRKNATRDA
TATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNR
SEDEEEDDNIDLEKNDDEEEPLKPTAEIGSKNEAVGQHPNPVGIPCEKYKEDNSGNDMEP
VLIDPNVKDHGDRRVPEMPRPTTAASPQNADLGVERDSDSAASESPPPLRRNDSGNSSNA
TSVIHSALPAPKPKLWSLAEIATSSDKCKGCSDAAQTVPRQLLTEIPGGRPMSSPLRDAS
QNIFPHSAALSRHVYYTSPFFQGYSNYHGTFGHLQSPGSNMGSATHLNGLHQTMLHRAEA
LARDSQARSQTQINICKDLRYEIKKGMTHV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcctcaaggctttctcttccaaccgtcggtgtctctagctctccattcctgt
cccccgttcagttccagtgtgattttaggaggaccaaggacagaggaactgggccggtcg
tcttcaggctcagccttcgccccttacgcgggatcaccggcgttcaatggttcatcccct
ggcttcaattctcacctccagtatagcggagagcagacggcggcactgaactcatttgtg
ggctccgcgtacgatccctcagcgggtatcgctggctctttagagtatcacccgttcggt
gtagcattgggctatccatatggagaccctgcatacaggaaaaatgctacaagagatgcg
actgccactctcaaagcgtggctcaatgaacaccgtaaaaacccctacccaaccaagggt
gagaaaatcatgctggccatcattactaagatgacacttacccaagtgtccacctggttc
gcaaatgccagacggcggttgaagaaagagaataaaatgacgtggaccccgaggaataga
agtgaggatgaggaagaagatgacaacattgacctggagaagaatgacgacgaagaagag
ccacttaagcccacggcagaaattgggtcgaaaaatgaagcagttgggcagcatccaaat
ccagtgggaatcccctgtgagaaatacaaagaagacaatagcggcaatgacatggaacct
gtcttaattgatccgaatgtaaaggaccacggggacaggagagtgcccgagatgccacgg
cccaccaccgcagcatctccccaaaacgcggaccttggagtggaaagggattcagactcc
gcagcctcggaaagtccacctccactgaggcgtaatgactcaggcaactccagcaatgct
acatcagtgattcactcggcccttccggccccgaaaccaaaactgtggtcgctcgcggag
attgcaacttcttcggataaatgtaaaggatgtagtgatgccgctcagaccgtgcccaga
caattacttacagagattccgggcggtaggcctatgtcatctccattacgagacgcttct
cagaatattttccctcacagtgcagccctatccagacatgtctattatacgtctcccttt
ttccagggttactcgaactatcatggcacttttggacacctgcagagccccggatccaac
atggggtcagcgacgcatttaaatggattacatcaaactatgttacacagagccgaggct
ctggcaagagacagccaagccaggagccaaacacagataaatatttgtaaagacttgaga
tatgaaattaagaaaggtatgacacatgtctag
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