Oncorhynchus nerka (sockeye salmon): 115108993
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Entry
115108993 CDS
T07952
Name
(RefSeq) carbohydrate sulfotransferase 1-like
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
115108993
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115108993
Enzymes [BR:
one01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
115108993
Glycosyltransferases [BR:
one01003
]
Unclassified
Sulfotransferases
115108993
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
CBM_17_28
Motif
Other DBs
NCBI-GeneID:
115108993
NCBI-ProteinID:
XP_029489399
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Position
LG25:40457322..40460683
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AA seq
430 aa
AA seq
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MNSAMQCSWKAVILLALLSIAIQYTAIRTFTAKPFQMCPVTASNPLNCGMLWQDAVDSSF
DQRICDDFLYFTSNVSRKTHVLILATTRSGSSFVGQLFNQHQDVFYLFEPLYHVQTTLLP
RLSHSRTAGDTRVMLGASRDLLRSLYDCDLYFLESYIKPQPANHSTDKLFRRGASKALCS
LPVCDAFSPGELNIDEGECVRRCGGLNMTLASDTCRERRHVAIKTVRIPEVSDLRALVED
PRLNLKVIQLVRDPRGILASRIETFRDTYRLWRIWRATGRRPYNLDLTQLTMVCEDFLGS
VTTGLSRPPWLKGRYMLVRYEDLARNPLQKTKEIYEYLGLIMDKNVGDWIQNNTRGSNDL
STKHKYGTVRDSAANAESWRLKLSYDMVDYTQTVCQQVLQELGYKTVSSPEELKNLSLTL
IEDKTFLPFL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagccatgcaatgttcctggaaggctgtgattctgctagccttactgtccata
gcgatccagtacacagccatcaggacgttcacagccaagccattccagatgtgtccagtg
acagcctcaaaccctctgaactgcggcatgctgtggcaggatgcggtggactcgtccttt
gaccagcggatctgtgacgacttcctttacttcacctccaacgtctccaggaagacccac
gttctcatcctggccacgacccgcagcggcagctccttcgtgggtcagctgttcaaccag
caccaggatgtgttttatctgtttgagccgctctaccacgtccagaccaccttgctcccc
cgcctgtcccacagcaggacggcaggcgacaccagggtgatgctgggggccagcagggac
ctgctccggagcctctacgactgtgacctttacttcctggagagctacatcaaaccccag
ccagccaatcacagcacagacaagctgttccggaggggagcaagtaaggctctgtgctcc
ctgcccgtctgcgacgcctttagtcctggagagttgaacattgatgaaggagagtgcgtc
aggaggtgtggcggtctcaacatgacgctggcgtcggacacctgccgtgagaggcgccat
gtggccatcaagacggtgaggataccggaggtgagtgacctcagggctctggtggaggac
cctaggctcaacctcaaggtgatccagctggtcagagacccccgagggatcctggcctcc
cgcatcgagaccttcagggacacctatagactctggaggatctggagggccactgggagg
aggccctacaacctggacctcacccagctcaccatggtctgtgaggacttcctgggttct
gtgacaacgggccttagcaggcccccctggctcaaagggaggtacatgttggtcaggtat
gaggacctggccaggaaccctctccagaagaccaaggagatctatgaatacctgggtctg
atcatggacaagaacgtaggcgactggatccagaacaacaccaggggaagcaacgatctg
tccaccaagcataaatacggcactgttcgggactcagctgccaatgcggaaagctggagg
ctcaaattgtcttatgacatggttgattacacacagactgtgtgtcagcaagttctacag
gagcttggttataagactgtcagttcccctgaggagctgaaaaatctgtctctgactctc
atcgaggacaaaacttttttaccttttttgtag
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