Oncorhynchus nerka (sockeye salmon): 115109003
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Entry
115109003 CDS
T07952
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115109003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115109003
03041 Spliceosome [BR:
one03041
]
115109003
03032 DNA replication proteins [BR:
one03032
]
115109003
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115109003
Spliceosome [BR:
one03041
]
Complex A
U1 snRNP components
Sm proteins
115109003
U2 snRNP components
115109003
Complex B
U1 snRNP components
115109003
U4/U6.U5 tri-snRNP components
115109003
Complex C
U2 snRNP components
115109003
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
115109003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
115109003
NCBI-ProteinID:
XP_029489407
LinkDB
All DBs
Position
LG25:complement(42834929..42836430)
Genome browser
AA seq
87 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDSYMNMQLANTEEYVDGALAGHLG
EVLVRCNNVLFIRGVEEEEEDGEMKDA
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgctgaatcccaaaccgtttctgaatggtcttactggtaagcccgtgatg
gtgaagctgaagtggggtatggaatacaagggatacctggtgtccgtggacagctacatg
aacatgcagttggccaacactgaagagtacgtagatggagcgttggctggacacctagga
gaggtgcttgtcagatgcaacaatgtcttgttcataagaggagtagaagaggaggaagag
gatggggaaatgaaagatgcttga
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