Oncorhynchus nerka (sockeye salmon): 115109056
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Entry
115109056 CDS
T07952
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115109056 (mindy4)
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115109056 (mindy4)
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
115109056 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
115109056
NCBI-ProteinID:
XP_029489481
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All DBs
Position
LG25:3589872..3603884
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AA seq
720 aa
AA seq
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MPQVMVVRVEEVAASLVREFLSRKGLKRTIACMDEEHPRTDASINNRSDLRQILHLEGLY
KNNKAQNCPLKSMLEIIVRHHIEGHKEDRPGFNSDVIQTVSTTQKLVTKSPILTPTVYDH
SRAEENTTGFIFNKTDMSRSLSEVVCPPHGTLSSFEVSDTPQRSFWSHSLSSEGQQDRQP
VPAFLDNDSAAKRESFSDKNTVVTTESTHKNKTSRLRRGMMAGPIASSPQESNRKRQTRR
LGGPNLLANNENHKNISDGPLLTTVQSQRMVKGLIELSTADPMRESQQPRRSTLGKGFDE
DGYGFERVGKDKHKTSRTKTMTNQNVDLHMSEMILDDIDDDEELRELSRVSYHSSSLPPT
TSDSQPMDQHTAIALKELILGSSTSCFSAEWRSQSFTFSDAPDLRYGLVQKKGGPCGVLA
SVQACILQKLLFEGTGSDAGHQKLRPSGAVRTKCLTLATAEILWRAGEGKKATIAITSGR
NHFTPTGHHRSEGVLEKMTCIDVDNLKDLQLLVEQHIQQFESGALGCILLTISAILSRSI
DRVREDMDVPNTTLIGAHGYCTQELVNLLLCGQAVSNVFNNNMELDSGNGNLTLLKGIRC
RSDIGLLSLFEHYNICKVGSNLKTPKFPIWVVCSESHFSVLFGVQELLSDQCVIGEFDLY
YYDGLANQQEEICLTVFVGTSGISAGCQGVDTDLIPPLEHCIRTKWKDAIVNWNDTEPIL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagttatggttgtacgagtagaagaagttgctgcatcgcttgtgcgggaattt
ctcagtcggaagggactcaagagaacgattgcctgcatggatgaagagcatccccgtaca
gatgccagcatcaacaatagatccgatctgcgacaaattcttcatttggaaggtctatat
aaaaacaacaaggcccaaaactgtcccctgaaatcaatgttggaaatcattgtaagacat
cacattgaaggacataaagaggacaggccaggcttcaacagtgatgtcatccagaccgta
tcaactacacagaagttggtgacaaagtctccaatattgacaccaaccgtgtatgaccac
agcagggcagaagagaacacaactggatttattttcaacaaaactgacatgtcaaggtca
ctttcagaggttgtctgtccacctcatggtacattatcatcatttgaagtgtcagatact
ccccagagaagtttctggagccatagcctttcctcagagggccagcaggaccgacagcct
gtacccgccttcctagacaatgacagcgccgctaaaagggagtccttttcagacaaaaac
acggtcgtcaccacagagagtactcataagaacaaaacaagtcgcctcagacgaggcatg
atggcaggtcccatagctagttccccccaggaatcgaatagaaaacgtcagactcgacgg
ttgggaggccctaatcttctggcaaataatgaaaaccacaaaaacatcagcgatgggcct
ctgttgactactgtccagtcacagagaatggttaaagggttgatagagctctccactgct
gaccccatgagagaaagccaacagccgcggcgcagcacactgggaaaaggatttgatgaa
gatggctatgggtttgagagagtaggaaaagacaagcacaagaccagcagaacaaaaaca
atgaccaatcaaaatgttgatctgcacatgtcggagatgattttggatgacattgatgat
gatgaggagttgcgtgagctctccagagtgtcctaccactcctccagtttgcctccaacc
acttctgatagtcaacccatggaccagcatactgccattgccctgaaagagctcatcctt
ggctccagcaccagttgtttcagtgccgagtggaggagtcagagtttcactttctccgat
gcacctgatctgagatatgggcttgttcagaagaagggtggtccttgtggagttctggct
tcagtccaggcttgtattctgcagaaacttctgtttgaggggaccggcagcgacgcaggg
caccagaaattaagaccctctggtgctgtgagaacaaagtgcctcactttagccactgct
gagatcctgtggagggctggggaggggaaaaaagccaccatcgccataacatcaggaaga
aatcatttcacccctacaggacaccatagatctgaaggagtactagaaaagatgacatgt
attgatgttgacaatctaaaggaccttcagttgcttgtggaacagcatattcaacagttt
gagtcgggagccttagggtgtatattgctcaccatctctgctattctctccagatctatt
gaccgggttagagaggatatggatgtccccaacaccacactcatcggagcccatggctac
tgcacacaggagcttgtcaatttattgctgtgtggacaggctgtgtccaatgtcttcaac
aacaatatggagctggattcaggcaatggaaacctgactcttctcaagggaataagatgt
cgcagtgacattggactgctgtccttatttgaacattataatatatgcaaggttggctcc
aacctgaagactcccaagttccctatctgggtggtgtgcagtgagagccatttcagcgtg
ctctttggtgtgcaggagctgctgagtgaccagtgtgtgatcggggagtttgacctgtac
tactacgacggcctagccaatcagcaggaggaaatctgcctaactgtctttgtaggtacc
tcaggaatatctgctggctgccaaggtgtggacactgatctcattcctcctcttgaacac
tgtatacggaccaaatggaaagatgccattgtcaattggaatgacaccgagcccatactt
tga
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