KEGG   Oncorhynchus nerka (sockeye salmon): 115109094
Entry
115109094         CDS       T07952                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04382  Cornified envelope formation
one04510  Focal adhesion
one04512  ECM-receptor interaction
one04514  Cell adhesion molecule (CAM) interaction
one04518  Integrin signaling
one04810  Regulation of actin cytoskeleton
one04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115109094
   04514 Cell adhesion molecule (CAM) interaction
    115109094
   04518 Integrin signaling
    115109094
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115109094
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115109094
   04810 Regulation of actin cytoskeleton
    115109094
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115109094
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115109094
   04515 Cell adhesion molecules [BR:one04515]
    115109094
   04090 CD molecules [BR:one04090]
    115109094
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115109094
  Exosomal proteins of breast milk
   115109094
Cell adhesion molecules [BR:one04515]
 Integrins
  Integrin alpha subunits
   115109094
CD molecules [BR:one04090]
 Proteins
  115109094
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 115109094
NCBI-ProteinID: XP_029489552
LinkDB
Position
LG3:35925174..35951711
AA seq 1094 aa
MVLPIRYFPIHVALFCLLEWTPISAFNLDTLNVLRKDGEPGSLFGFSLAMHRQLIPSDKR
ILLIGAPRAKALANQRANITGGLYSCDITTESDDCDRIDFDNEEDVRVENKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVDTAQESRDITGRCYVLSQDLTIDTSSDEDGGNWKFCEG
RARGHERFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEKGFYDDGPY
EVGDENRLDPDLVPVPANSYLGFSLDSGFSITKGHGLTIVSGAPRANHCGAVVLLRKENE
ASARLSPEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFMKEGDIGGAVYVYIN
QAGKWAKITPIRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYADAGAGKVYIYHGSA
NGINTMPAQILEGKPNNIRLFGYSLAGNMDLDKNSYPDIAIGSLSDTVLVYRARPIISIK
KDVKITPKEIDFTKKTCGNSICLTVEACFTYKANPASYSPKLTIRYAFEAEADRRKQGLI
SRVLFLNKSRTDQDFQSTGFLDLRGQNKRACTKTKIRLQDNIRDKLRGIPIEVSVGIQGT
KRQKRQNALPQLVPILDNSQPSKVITEVNFLKEGCGNDNICQSNLQLEYRFCSKEPNQEV
FPPLQMQNGLPVISLSDQKDIALEVTVKNRNGDDAHEAKLVGMFPNALSFSGFRSQKTTR
DKPVLCLANQNGSQTECELGNPFKRDSEVTFYIILSTAGISLNTTEIDIDLELQTTSTQE
RTGSLKARAKVVIEMLLSVAGVARPSQVYFGGDVQGESAIKTEEEIGSVIDYEFRIINLG
KPLKSFGTASLNIQWPKENVDGKWLLYLVKISTTGLEEVLCSPETEINSLKHIQESSTSR
KKREAGGKTSGGKISLVSDQRKHKILMCGNGYDSRCVVIKCPLLGLDSSAVISLRSRLWN
ATFLENYASLNYLDIIVKASISLDAPAKNMVLRNAETQVRVTVFPEKAVAQFGGVPWWII
LVAVLAGILMLALLVFLLWKCGFFKRSKHDDSVPRYHAVRIKKGACQFKDGKAKLDSFEK
KQWMTSWNENESYS
NT seq 3285 nt   +upstreamnt  +downstreamnt
atggttctcccaataagatattttccaattcatgtggcacttttttgtttgctagaatgg
actcccatatcagccttcaacctggataccttgaatgtcctgaggaaagacggggaaccg
ggcagtttatttggattctctctagccatgcaccggcaacttattccttcagataagaga
atactgttgattggagcaccaagagccaaagctctggccaaccagagagccaacataacc
ggaggcctgtacagttgtgacatcaccacagaatccgatgactgtgatcgcatcgatttt
gacaatgaagaggatgtgagagttgagaacaaggagaaccagtggatgggggtgacagtt
aacagccagggccccggggggaagattgtgacctgtgctcatcgctaccagagacgtctg
tttgtggacactgctcaggagtcccgtgacatcacaggccgctgctacgtcctgagtcag
gacctcactattgatacgtcctctgatgaagacggagggaactggaagttctgtgaggga
cgtgccagaggccatgagaggtttggctcatgccagcagggtctggctgccacgttcacc
aaggactaccattacgtggtgtttggagcgcctggcgcctacaactggaaaggcattgta
cgtgtagagcaaaagaacaacactttgttggaaaagggattttatgatgacggaccttat
gaagttggagatgagaaccgcttggatcctgacctggtgcctgtgcctgctaacagctac
ctaggattttcccttgattctggctttagcatcaccaaggggcatggtctaactattgtg
tctggagcaccacgagccaatcactgtggggctgtggtcctgttgcgaaaagagaatgaa
gcgtcagcaagactctccccagagtacattctagaagggcctggactggcatcgtctttt
ggatatgatgtagctgtggtcgacctgaatggagatgggtggcaggatattgttgtggga
gcccctcagttcttcatgaaagagggagacattggaggagctgtttatgtctacatcaac
caggcaggaaagtgggccaagatcaccccaatccgcctcaatggaaccaaagactcaatg
tttgggctggcagtggagaacatcggtgacatcaatcaggactcctatcaagacattgct
gttggagcgccctacgctgacgctggtgcaggaaaagtgtacatttaccatggttctgct
aatggaatcaacaccatgcctgcacagatccttgagggaaagcccaacaacatcagatta
tttggatattctctggctgggaacatggacttagataagaattcctatcctgatatagcc
attgggtcactctcagatacagtactcgtttacagggcaaggccaattattagtatcaag
aaggatgtcaaaattactccgaaggaaattgacttcacaaagaaaacctgtggcaacagt
atctgcttgaccgtggaagcatgcttcacctataaagcaaaccctgcatcctacagccca
aaactaactatccgctatgcatttgaggctgaagcagatcgcaggaagcaagggctgatc
tctagggtcctgtttctgaacaagtctcgcaccgaccaggacttccagtccaccggattt
ctggacctcaggggacaaaacaaaagagcgtgtaccaagacaaaaatcagactgcaggat
aacattagggacaagctgcgtggtattcccattgaggtgtcagtgggaatccagggtacc
aagcgtcagaagaggcagaacgctctcccccagcttgtgcctattcttgacaactcccag
ccaagcaaggtcatcactgaggttaacttcttaaaggaaggatgtggaaatgataatatt
tgccagagtaatttacaactggagtacagattctgctccaaagagcccaaccaagaggta
ttccctccattacagatgcagaatgggctaccagtgatctccctcagtgatcagaaggac
atagctctggaggtgacagtgaagaacagaaatggggatgatgcgcatgaggctaagctg
gtggggatgttccctaatgctctctcattctccggctttcgctctcagaaaactacgagg
gataaaccggtgctttgtttagccaatcagaatggctcccagacagagtgtgaactgggg
aatccattcaaaagagattcagaggttactttctacataatcttgagcactgctggtatc
tctctcaataccacagaaatcgacattgaccttgagcttcaaacgaccagtacacaggaa
agaacaggcagtctgaaagcaagggcaaaagtagtgattgagatgttactttctgttgca
ggagttgcgagaccttcccaggtgtattttgggggcgatgtgcaaggagagagcgccatc
aagacagaagaggagatcggcagtgtgattgattatgaatttaggataatcaatttgggt
aagccgttgaagtcctttggcacagcctcgttgaacattcagtggcccaaagagaatgtg
gatgggaagtggctgttatatctggttaagatcagcaccactggcctggaagaggtcctc
tgctccccagaaactgagatcaactctctcaaacacattcaggagtctagcacatctagg
aaaaagcgtgaagctggaggcaaaacatctggaggcaaaatctctttggtatcagaccaa
agaaagcacaagattttgatgtgtggcaatggctatgactctagatgtgtggtgatcaag
tgccctctactgggcttggacagtagtgcagtgatttctctaaggtcccgtctgtggaat
gctaccttccttgagaattacgcgtctttgaactatcttgatataattgtgaaagcttcc
atcagccttgatgctcctgcaaagaatatggttctcaggaatgctgagactcaggtgaga
gtcacagtgtttccggagaaggcagtagcccagtttggtggagtcccatggtggatcatc
ctcgtggctgtcctggctggtattctgatgttggcgttgctagtgtttctactctggaag
tgtggatttttcaaacgctcaaaacatgatgacagcgttccaagataccatgccgtacgg
attaagaagggggcttgtcagtttaaggacggaaaagccaagctggattcctttgagaaa
aagcagtggatgacaagctggaatgagaacgagagctactcatga

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