Oncorhynchus nerka (sockeye salmon): 115109141
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Entry
115109141 CDS
T07952
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115109141 (ddx49)
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115109141 (ddx49)
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
90S particles
Helicases
115109141 (ddx49)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
115109141
NCBI-ProteinID:
XP_029489624
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Position
LG25:7047779..7056229
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AA seq
477 aa
AA seq
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MLDFSSLGLSDWLIQQCKQMGISKPTQVQENCMPPILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPMGLRDCIIVGGMDMITQALELSKK
PHVVVATPGRLADHIRSSDTFSIKKIQFLILDEADRLLEQGCTDFTKDLEVILAAVPVKR
QTLLFSATLTDTLQELKGIAMNKPFFWESKSEVRTVEELDQRYILTPEKVKDAYLVHLIQ
KFQDEHDDWSIMIFTNTCKNCQILTMMMQKFNFPTISLHSMMKQKQRFANLAKFKSSVFK
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRHGVSITLVTQYDIHLV
HSIEGQIQAKLKEYPVEEKEVLKILTQVNVARRECEIKLESTDFDEKKEINKRKQMILEG
KDPDVEAKRKAELEKIRSEKKLFKERIQETIQKKQHGMQKKLMKQKHIQKEKAVKST
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttggatttttcctctctcggtctgtcagattggctgattcaacaatgtaaacaaatg
gggatcagtaaaccaactcaagtccaggaaaactgtatgccaccgattctggaaggtcgg
gattgtatgggttgtgccaagactggcagtgggaagacagctgcctttgtgctaccagtg
ctacagaaattatctgaggacccatatggaatcttctgtttagttctcacacctaccagg
gaattggcttaccagattgctgaacagtttagagtcctgggaaaaccaatgggcttgcga
gactgcatcattgttggtggaatggatatgatcacacaggccttggagctctctaagaag
ccacacgtcgttgtagccactccaggaagactggcagaccacattcggagctccgacaca
ttcagcatcaagaagatccagtttctgatccttgatgaggccgaccgcctgcttgagcaa
ggctgcacagacttcaccaaagacttggaggtgatcctggccgcggtgcctgtcaaacgc
cagacgctgcttttcagtgccaccctcacagacacactacaggagctcaagggcatcgcc
atgaacaagcccttcttctgggaaagcaagtctgaggtccgcacggtagaggagttggat
caaaggtacatcctgacaccagagaaagtgaaagatgcctacctagtgcacctgatccag
aagtttcaagatgagcacgacgactggtcgatcatgatcttcaccaacacctgcaaaaat
tgccaaatcctcacaatgatgatgcagaaatttaactttccaaccatctccttgcattca
atgatgaagcagaaacaacgtttcgccaacctcgcaaagttcaagtccagtgtctttaaa
atcctgattgcaactgatgtggcttccagaggtctggatattccaacagtccaggttgtc
atcaaccacaacacgccaggtctgcccaagatctacattcacagagtcggccgaactgcc
agagcaggaaggcatggtgtctcgatcacactggtgacacagtatgacatccacttggtt
cattccatcgagggacagatccaggccaaactgaaggaatatccagtggaggagaaagag
gttctgaagatcctcactcaagtcaacgtggccagacgggagtgtgaaattaaacttgag
tcaacggattttgatgagaaaaaggagatcaacaagagaaaacagatgattttggagggg
aaagatccagacgtggaggcaaagagaaaggctgaactggagaagataaggagtgagaag
aagttgttcaaggagaggatacaggaaacaattcagaagaaacaacatgggatgcagaag
aaactgatgaagcaaaaacacattcaaaaggaaaaggcagtgaagtccacataa
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