Oncorhynchus nerka (sockeye salmon): 115109170
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Entry
115109170 CDS
T07952
Name
(RefSeq) DAZ-associated protein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115109170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115109170
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115109170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115109170
NCBI-ProteinID:
XP_029489667
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All DBs
Position
LG25:7828471..7847407
Genome browser
AA seq
436 aa
AA seq
DB search
MNSNLAGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK
DPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKVRTKDGWKGSKADSNKSKKIFVGGI
PHNCGEPELREYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG
KKVEVKKAEPRDSNAPGQLGPSQWGPRGILSAANGWSAQPAQGWQQSYGPPGVWVSTGQP
LGGYGPPLSAGRGAPAQPPSPFNAFLVTAAPAGGFGAPQAYAQQGYSTPPQFGYSFGTPH
GDQYAPQGVPPPPTTPGTGPLGFAPATTPTQDMSKAPTGQPDFPYSQYGLGNYPQEPSSY
GPTRPSHSNGQDVQGGSSAGYGQDLSGFGHTFADPSQQTASYGAPTAQPAVGPQAAAAVF
ARVQNHNVTGFHPYRR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaacttagccggagatgaagttgggaaactgtttgtgggtggcttggactgg
agtacaacacaggaaactttgagaaactatttctcgcagtatggggaagtagttgattgt
gtcatcatgaaggacaaaaccacaaatcagtcccggggctttggttttgtcaaattcaaa
gaccccaactgtgtccggactgtactggagaccaaaccccataatctcgatggcagaaat
attgaccccaagccatgtactcccagaggaatgcaacctgaaaaagtacgaactaaggac
ggctggaagggcagcaaagctgacagcaataaatcaaagaagatatttgtcggcggaatc
ccccataactgtggtgaaccagaactccgggaatatttcaatagatttggagtggtcaca
gaggtggtaatgatctatgacgcggagaaacagaggccccgaggttttggatttattact
ttcgaggccgaacaatcagtggaccaggctgtcaacatgcattttcacgacatcatgggc
aaaaaagtggaagtgaaaaaggctgaacctcgggacagcaacgctcctggccagcttgga
cctagtcaatggggacccagaggcatcctgagtgcagccaatggttggtcggcacagcct
gcccagggctggcagcagagttatgggcctccgggagtttgggtgtctacaggccagccc
ttgggtgggtacgggccccctttatctgcgggtcgtggagctcccgcacagcccccctcg
ccattcaacgcattcctcgtcacagcggccccggcgggggggtttggggcacctcaggcc
tacgctcaacagggatacagtacaccacctcaatttgggtacagttttggcacacctcat
ggtgaccagtatgcaccacaaggagtgccgcccccgcccacgactccaggaacagggccg
ctagggtttgctccagccaccacacctactcaggacatgagcaaagcacccacgggacag
ccggacttcccttacagccagtatggcctgggtaactaccctcaggagccctcttcctac
ggaccaacgcgtccttctcacagtaatggtcaggatgtgcagggaggaagtagtgcaggt
tatggtcaggacctgagtgggtttgggcatactttcgcagaccccagccagcagactgcc
tcttacggggcaccaacagcacaaccggcagtgggaccccaggctgccgcagccgttttt
gctcgtgtacagaatcacaacgtaacgggcttccatccataccggcgctga
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