Oncorhynchus nerka (sockeye salmon): 115109242
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Entry
115109242 CDS
T07952
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115109242
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115109242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
115109242
NCBI-ProteinID:
XP_029489803
LinkDB
All DBs
Position
LG25:complement(10536347..10647670)
Genome browser
AA seq
1647 aa
AA seq
DB search
MPSLPSPSPAMDGENYLHPEGPQLDSSIFEVASSNMESYLYPSGSWASFSQQSGGYNAHC
PMQSGNQQYHLNAPMPDLDMFSHSGFHDDFLNLPRNGDFPQNLSCIDDLSNSLFSSPADS
LSDYTDAQAFIPTDNLAHVPTIWDINTPAQSQLELNANRFQDLNSLEDIAAIISTPPLGG
YQQTQRNQTPAEEEAEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSVPP
PDITYTLSIPDSTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTV
AGIILENYLKGRKKALWFSVSNDLKYDAERDLKDIDAPTIPVHALNKIKYGDTATSEGVL
FATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDLQ
HNLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAIEKRGVGAMEIVAM
DMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKLVYNKAAKLWAEALAVFMRAADALCLVS
RKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCIVIGLQSTGEARTREVLDE
NDGHLDRFVSAAEGVFKALVQKHFPSEKQRREKARGNKRKRKPRGRQPKFPKHTMVHLGG
VINISDDSSTDTDGMDTDSNSSPDSLMDNNDDVIFVQHTSCHTASIEKMKQSLLNKIADL
GKELPLNTLDELIDQFGGPEMVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEK
DRFMCGEKMVAIISEAASSGISLQADKRVKNQRRRVHITLELPWSADRAIQQFGRTHRSN
QVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKA
LDKITKAILGHIESKVSPPKGYPGGDALFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSIT
KFLNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQETF
MTVGNPQDGQVVLYKISVDRGMPWEEAYEKVQNLNSPDEGFYLSHKLRGNHPCVLLAEQG
RGRNFIVYKPNIGKQAHPESLDNLQLRYRKVTPDQAKDSWESQFNFSFGKCSHANWNGKC
KKIEEGQECLQGMRLRQYHMLCGALLRVWKYVADVVSDITCSSILQIVRLKTKNSNKQVG
IKIPENCVARVRQELLKMDEEVKRRRKEKEQQRAQEQQRAQEQRLAEERQLQNQHLLAKL
YSQRQTLNHSFNNQNLSQGLKTQHLSLAQANPLQVKPLLQPKPSQLKPQLGPVNQLPSMA
SPTSHFSNFPHHFPSLHLLQPDPSSSSMPPRTGEEVLDLTVSPSPSPDSKERGLVLDCLT
RDGFGLDSLILLSELAAQNTAHKLQQPLQPLPPLTKPQQLLSPQQIQPQLQSPQQIHPQL
QLPQQIHPQLQSPQQIQTQLQSPQQIQLQSPQQIQPQLQSPQQIQPQLQLPQQIQLQSPQ
QIQPQLLSPQQIQPQLQSPQQIQQRLDSPTLINSDHQDYYDILKLLEDPDHLPYSLSSQT
TTNPSTSSNTVAQVSSGFLSSPSTPPSSSLFSPSALAPSEQQPLPLANGHCSTDALINVR
EVLDNMLRTSADRQTVIHYRLPEWDSV
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcccatcaccctcaccggccatggacggggagaactacctgcacccagag
gggccacagctggacagcagcattttcgaagttgcctcttccaatatggagagttatctg
tatccctctggttcctgggcatcattttcacagcagtctggaggctacaacgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgctcccatgcccgatttggacatg
ttcagccattcagggttccatgacgatttcctcaacctccccaggaacggagacttccct
cagaacctgtcctgcatcgatgacctctccaactctctgttctcgtctccggccgactcg
ctgtcagactacaccgatgcccaggccttcatccccacagataacctggcccacgtgccc
acgatatgggacataaacacaccagcacagagccagctggagctgaatgccaacaggttt
caggatttgaacagtttggaggatatcgctgccataatcagcaccccacctttgggagga
taccagcagactcagagaaaccagactccggcagaagaggaggcagaggaggaggaggaa
gagacagaggagctgggacatgtagacacctacgctgactacaaaccatccaaatccacc
atagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtccctcca
cctgacatcacctacactctgtccattcctgactccaccatcaactgtggcctgctctct
gccctgcagctggaggccatcatatacgcatgccagcaacacgaggtaattctgcagaac
aaccagagagcaggcttcctgataggagatggggccggagtagggaaaggccgcacagtg
gccggcatcatcctggagaattacctaaagggaaggaagaaagcgctatggtttagtgta
tccaatgacctgaaatacgacgcagagagagatctgaaagacatagatgctcccaccatt
cctgtgcatgccttaaacaagataaagtatggagacacagctacctcagaaggagtcctg
tttgcgacatactctgcactgatcggggagagccaagcaggtgggcagcaccgcaccaga
ctcaagcagatcctggactggtgcaagcccggctttgatggagttattgtgtttgacgaa
tgccacaaggccaagaatgctacgtccaccaagatgggcaaggccgtgctggacctgcag
cacaacctgccgctggccagggtggtttacgccagtgccacaggtgcctctgagccaaag
aacatgatctatatgagccgcctggggatctggggcgagggcacgcccttcaagaccttt
gacgacttcctgcacgccatcgagaagaggggtgtaggggcgatggagattgttgccatg
gacatgaaggtgagtgggatgtacatcgcccggcagctgagcttctcaggggtgtccttc
cgcatcgaggagatcggtctggacgacgacttcaaactggtctacaacaaagctgccaaa
ctgtgggcggaggcgctggccgtgttcatgcgtgcagcggacgcgctgtgtctggtcagc
aggaagtccctgtggggtcagttctggtcttcccaccagcgcttcttcaaatacctctgc
atcgccgccaaggttcgctgcctggtggagctggccaagaaagaactgaaagctggcaag
tgcatcgtgattggtctacagtccacaggagaggcccgaaccagagaggtcctggatgag
aacgatgggcacctggacagattcgtatctgcagcagagggtgtgttcaaagctctggta
cagaaacactttccctccgagaagcagaggagagagaaggcacgtggaaacaagagaaaa
cgtaagcccaggggccggcagcccaaattcccaaagcacaccatggttcatctggggggc
gtgatcaacatcagtgacgacagcagcacagacacggacggcatggacaccgactccaac
tcctcgccagactccctgatggacaataacgatgacgtcatcttcgtccagcacaccagc
tgtcacacagccagtatagagaagatgaagcagagcctcctgaacaagatcgctgacctg
ggaaaggaactacctctgaacactctggacgagctcattgaccagtttggaggaccagag
atggtatcggagatgacgggtcgtaagggtcgagtggtgcggcgtcctgacggaagcgtg
cgctacgagtcgcgtgcagagcagagccataccatagaccacatcaacctcaaggagaag
gaccgcttcatgtgtggagagaagatggtggccatcatctcagaggcagccagctcgggc
atctccttgcaggcagacaagcgggtgaagaaccagcgtcggagggtccacataacccta
gagctgccctggagtgcagacagagccatccagcagtttggtcgtacccatcgctctaac
caggtgacggctccagagtacatcttcctcatctctgagctggctggggaaagacgcttc
gcctccattgtggccaagagactggagagcctgggtgcattgacccacggtgacaggaga
gccacagagtccagagacctgagcaaatacaactttgaaaacaagtacggtaccaaggct
ctggataagatcaccaaagccatcctgggccacatcgagagcaaggtgtcccctcccaaa
ggttaccccgggggtgatgctctgttcttcagagacatgaagcatggcatgatggacgtg
ggtatcttctgcaaggagccacggtttggtctcagcactgagaaagactgcagcatcacc
aagttcctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccagtac
ttcaccgacaactttgactacctgatcgagaaggacaaaaaggagggcaaatacgacatg
ggaatcctagatctggccccaggtaacgatgaaatctacgaggagaagcaagagaccttc
atgacagtgggaaacccccaggacggacaggtcgtgctctacaagatcagcgtggacaga
ggtatgccctgggaggaggcctatgagaaggtccagaacctcaacagtcctgacgagggc
ttctacctctcacacaagttgcgggggaaccacccgtgtgtgctgctggcggagcagggc
cgagggaggaacttcatcgtctacaagcccaacatcgggaagcaggcccacccagagagc
ctggacaacctgcagctacgctaccgcaaggtgactccagaccaagccaaggacagctgg
gagagccagttcaacttctcctttgggaaatgtagccatgctaactggaacgggaagtgt
aagaagatcgaggagggtcaggagtgtctgcagggaatgcgtctgcgccagtaccacatg
ctgtgtggtgcgctactgcgcgtctggaagtatgtggctgacgtggtctctgacatcacc
tgctccagcatccttcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtcggt
atcaagatcccagagaactgtgtggcccgagtgcggcaggaacttctcaaaatggacgag
gaggtgaagagaaggcgcaaggagaaggagcagcagcgcgcccaggagcagcagcgcgcc
caggagcagcggctagccgaggagcggcagcttcagaaccaacacctgctggccaagctt
tacagccagagacagaccctgaaccacagcttcaacaaccagaacttgtcgcagggcctc
aagacccagcacctgagcctggcccaggccaatcctctacaggtcaagcctctactccag
cccaaaccttcacagctcaaaccccagctcggtccagtcaaccagctccccagcatggcc
agccccacctcccacttctccaatttcccccaccacttcccctccctgcacctcctgcag
cccgacccctcctcctcctccatgccccctcgaaccggggaggaggtcttagacctgacg
gtgagcccctctccctccccagacagcaaagagagaggcctggtcctcgactgcctgacc
agagacggctttggcctggactctctgatattgctgagcgagctcgccgcccagaacact
gcacacaaactgcagcaacctctacagccactgccaccactgacaaagccacagcagcta
ctgtcgccacagcagatacaaccacagctacagtctccacagcagatacatccacagcta
cagttgccacagcagatacacccacagctacagtcgccacagcagatacaaacacagcta
cagtcgccacagcagatacagctacagtcgccacagcagatacaaccacagctacagtcg
ccacagcagatacagccacagctacagttgccacagcagatacagctacagtcaccacag
cagatacaaccacagctactgtcgccacagcagatacaaccacagctgcagtcaccacag
cagatacagcaacggttggacagtccgactctaatcaacagcgaccaccaggactactat
gacatcctcaaactgctggaagatccagaccatctgccttactctctgtctagccagaca
actactaacccctccacttcctccaacacagtggctcaagtctcgtccggcttcctctct
tccccctctacccccccctcctcctctctcttctctccttcggccctggccccctcagaa
cagcaaccgctccctctggccaacggccactgcagcacggacgccctcattaatgtgcgc
gaagtgctggacaacatgctgcggaccagcgcagaccggcagacggttatccattaccgg
ctgcctgaatgggactctgtgtaa
DBGET
integrated database retrieval system
