Oncorhynchus nerka (sockeye salmon): 115109263
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Entry
115109263 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115109263
04121 Ubiquitin system [BR:
one04121
]
115109263
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115109263
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115109263
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115109263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
C1_2
Zn_ribbon_6
zinc_ribbon_16
DZR_2
zf-HC5HC2H
DZR
Motif
Other DBs
NCBI-GeneID:
115109263
NCBI-ProteinID:
XP_029489850
LinkDB
All DBs
Position
LG25:11874068..11880647
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AA seq
325 aa
AA seq
DB search
MAEAPPWPSRFFCHRCSEEISPRLPDYTCPRCDSGFIEELLEERRSENGSTSTISSGDQN
QHPFENVDPSNIFTFPSGYGQFAMGVFDDSFDFGAGLGGAGLGGAGLGGAGLGTEDNRDA
ENRREREMASRQRYGARQPRGRHGVRRQAGRPEGVPTLEGIIQQLVNGIIAPAAVPNIGV
GPWGVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADGDKIMSLPTVLITQEHVGSG
LECPVCKEDYSAGEKVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGLNTAMNPPGLS
GMNFASSSAPPSSSSTSNENSANNS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcacctccatggcccagccggtttttctgtcacagatgttcggaagagatc
agccctcgtctccccgattacacatgtcctcggtgtgattctggctttatcgaggaactg
ctggaggagagacgcagtgaaaatgggtccacatccaccatctccagcggtgaccagaac
caacatccatttgagaatgtggacccttcaaatatatttacgttcccctcgggttacggc
cagtttgctatgggtgtctttgacgactcctttgacttcggagcggggctgggaggagct
gggttgggaggagcagggctaggaggagctgggttgggaacagaggacaaccgcgacgca
gagaatcggcgagaacgggagatggcatcacggcagcgatacggcgccaggcaacctcgc
ggtcgccatggcgtcaggaggcaggcagggagaccggagggagtgcccactttagaggga
atcattcagcagctagtgaatggaataatcgcccctgcggcagtgccaaatattggtgtg
ggaccctggggcgtgcttcactcaaaccccatggattacgcctggggtgccaacggacta
gatgcaatcattacacagttattaaatcagtttgagaacactggccctccaccagctgat
ggggacaaaatcatgagccttcccacagtcctaatcacacaggagcatgtaggctctggt
ctagaatgtccagtgtgtaaagaagactacagtgctggagaaaaagttaggcaacttcca
tgtaatcatttgtttcacaatgattgcatagtaccctggcttgaacagcacgacacatgt
ccagtgtgcaggaaaagcttaagtggactgaacacagccatgaatcctccaggtctatca
gggatgaactttgcctcttcctctgcacccccgtcctccagctcaaccagcaatgagaac
tcggccaacaactcctaa
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