Oncorhynchus nerka (sockeye salmon): 115109265
Help
Entry
115109265 CDS
T07952
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115109265
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
115109265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
115109265
NCBI-ProteinID:
XP_029489854
LinkDB
All DBs
Position
LG25:11903122..12005203
Genome browser
AA seq
909 aa
AA seq
DB search
MDGYITSAGTLAQGQGTEVTGATTTATVKKDPRVSFSNAPSRKASSSVQNQQKMNSVSCF
KSEDISQVVTDEWEPNDNRTYMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQQRVKSAGN
WIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITFFKDETTAPWIIFNVVSDTFFLMDLVL
NFRTGIVLEDNTEIILDPKKIKRTYLKTWFVVDFISSIPVDYIFLIVEKGVDSEVYKTAR
ALRIVRFTKILSLLRLLRLSRLIRYVHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWD
GCLQFLVPMLQDFPQDCWVSLNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDI
WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIH
DYYEHRYQGKMFDEESILEELNEPLREEIVNFNCRKLVASMPLFANTDPNFVTAMLTKLR
FEVFQPGDYIIREGTIGKKMYFTQHGVTSVLTKGTMGMKLSDGSYFGEICLLTRGRRTAS
VRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSG
IFNNRENEMIQEIVKYDREMVQQVDLNRPRAMSMSNPPTHGGIFTPPGPPQSSAIATLQQ
AVAMSFCPPMVGPLAGAGGLQSPRMVRRFKVMQSVSSPVPASPPPQTQQTMHPQLYASGA
FVTALSSPPIQSPLAAGGRTFQYGPSSGSQVSLVQQVVPSPTHRPNIHNSTRSLHMGSLG
QNARALSASQPSLPQGGAQPVAPCPSQSARVSSTSIGPPQASWGNAGVRSAMTHRMVLPH
QMSAGAFPLASLPGTVTSLGMGMGMGMGTGVGMGAGLAPALLDSGLPKSDFIASLPETDR
ARSRLSSNL
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggacggttatattacctcagcggggaccttagcacaggggcaagggaccgaggtgacc
ggggcaacaactactgccactgtgaaaaaggacccccgagtttccttctcaaatgcccct
agtagaaaagcatcgtcctctgtacagaaccaacagaagatgaattctgtctcatgtttt
aaatctgaggatatatcccaggttgtgacagatgaatgggaaccaaatgacaatcgaaca
tacatgcagcggcaatttagttccatgcttcagcctggagttaataaattttcactgcgt
atgtttgggagccaaaaagctgttgaaaaggaacaacagcgcgtcaaatcggccggtaat
tggattattcatccatacagcgatttcaggttctactgggatttcaccatgttgatgttc
atggtgggcaacctcatcatcatcccagtggggatcaccttcttcaaggacgagaccacc
gcgccctggatcatcttcaacgtggtctctgataccttcttcctcatggacctggtcctc
aacttccgcacaggcatcgttttagaggacaacactgagatcatcctggaccccaagaag
atcaagaggacgtacctgaagacctggtttgtggtggactttatctcctccatccctgtt
gattatatcttcttgatcgtggagaagggggtcgactctgaggtgtataaaacagccaga
gccctgaggatcgtgcgctttaccaagatcctcagtttgctgaggctgctcaggctgtcc
aggctaattcgctatgtccaccaatgggaagagatcttccatatgacctatgacctggcc
agtgcagtgatgcgtatcttcaacctgattggtatgatgttgctgctgtgtcactgggat
ggctgtttgcagttcctggttcccatgctgcaggatttcccccaggactgctgggtctcc
cttaacaagatggtgaatgactcgtggagcgagctgtactcctttgccctgttcaaagcc
atgagtcacatgctgtgtatcggttatgggcgccaagccccagagagcatgtctgatatc
tggttgaccatgctcagtatgatcgtgggagccacctgctacgccatgttcatcggccat
gccaccgcccttatccagtccctggactcatcccggcgccagtaccaggagaagtacaaa
caagtggagcagtacatgtctttccacaaactgccagctgacttccgacagaaaatccat
gactactacgagcacagataccagggcaagatgtttgatgaggagagcatcctggaggag
cttaatgaaccactgcgggaggaaattgtcaacttcaactgccgtaagctggtggcgtcc
atgcccctgtttgccaacaccgaccccaactttgtgacggctatgttgactaagctccgc
tttgaggtcttccagcctggagattacatcatcagggagggcaccatcggcaagaagatg
tacttcacccaacatggtgtgaccagtgtcctgaccaaaggaaccatgggcatgaagctc
tcagatggatcctattttggagaaatctgtctgttgacccgaggcagacggacggccagt
gtgcgagcggacacgtactgccgtctctactccctgtctgtggataactttaatgaggtg
ctggaggagtatcccatgatgagacgagccttcgagactgtggccatcgaccgactggac
cggatagggaagaagaactcgatcctaatgcacaaggttcagcatgacctcaattcgggc
atcttcaacaaccgggagaacgagatgatccaggagattgtgaaatatgaccgtgagatg
gtgcagcaggtggacctgaataggccacgtgccatgtccatgtccaacccacccacacat
ggcgggatcttcaccccccctggccctccccagagctcagccatcgccaccctccagcag
gctgtggccatgagcttctgtccccccatggtaggccctctggcaggggctgggggcctg
cagtcccctcggatggtgcggaggttcaaggtgatgcagagtgtatccagcccagtgcca
gcctcccctcccccacagacccagcagaccatgcatccccagctatatgccagtggtgca
ttcgtcacggccctctccagcccccccatccagagccccttagcggctgggggacggaca
ttccagtacgggccctcttctggctcccaggtctccctggttcagcaagttgtgcccagc
cccacacacaggcccaacatccataacagcacccggtctctgcacatgggcagtctgggt
cagaatgccagggcactgtccgcctctcagccctccctgccccagggaggggctcagccc
gtggctccctgcccatcacagtctgcccgtgtctcctccacctccatcgggccccctcag
gcctcctggggcaatgcaggggtcaggagcgctatgactcataggatggtgcttccccac
cagatgtctgcgggggcgttccctctagcctccctcccggggactgttacatcgctggga
atgggcatggggatgggcatgggcacgggagtgggcatgggggcaggcttggcaccagcc
ctgctggactcaggattacccaagagtgattttatagccagcctccctgagacagaccgt
gccagatcgaggctctcttccaatttgtga
DBGET
integrated database retrieval system
