Oncorhynchus nerka (sockeye salmon): 115109276
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Entry
115109276 CDS
T07952
Name
(RefSeq) synaptic vesicle glycoprotein 2B-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115109276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115109276
Transporters [BR:
one02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
115109276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
115109276
NCBI-ProteinID:
XP_029489875
LinkDB
All DBs
Position
LG25:complement(12804070..12856592)
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AA seq
688 aa
AA seq
DB search
MADPYQNNVYHQGGGDPYGTYGEGGDQEGYGYQGESYPQEEDAASDATEGHDDEDQMYEG
EYQGIPHPDEVKAAQRAARAKARQAQAGATELEELAEQYEDIMEDCGHGRFQWTLFIVLG
LALMADGVECFVVGFVLPSAEKDMCLSNGEKGMLGLIVFLGMMVGAFIWGGMADKLGRRK
CLIWALTINCVFAFFSSFAQGYGFFLFFRLISGIGIGGSVPIVYSYFSEFLQMDKRGEHL
SWLCMFWMVGGIYASFTAWGIIPHYGWGFSMGTEFQFHSWRVFVLVCALPAITSLVGLMF
MPESPRFLLENAKHDEAWMILKNVHDTNWRAKGQPEKVFQVTHIKAPKTQEDEFIEIQSA
TGTAMQRWAVRTLTLCKLVLKNVASLLGPELRLSTLFMAIIWFTMAFSYYGLGVWFPDMI
KSLQQEEYESKVKVFHRERVERFHFNFSLENQIHREGEYINDKFINIQMKSVKFEDSLFE
DCYFEDIESTETIFENCTIRSTVFYNTDLYEERFIDCRLENTTFLHNKKGCHLDIDEEND
VLLYLVSFLGSLAVLPGNIISALFMEKIGRVKIIGLSMLISAGCTFFLFLSFSQAAIIAW
QCLFCGVSVAAWNGIEVITVELYPASKRATAFGVLNALCKLAAILGTSIFASFVGVTKVV
PILLSCTALVCGGLVALKLPETREKILQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccttaccagaacaatgtgtaccaccaaggaggaggtgacccctacggcacc
tacggagagggaggagaccaggagggctacggttaccagggcgagtcctaccctcaggag
gaggatgcagccagcgatgccacggagggccatgatgacgaggaccagatgtacgagggg
gagtaccaggggatcccccaccctgacgaggtgaaggcggcccagagggcagcgagggcc
aaggccaggcaggctcaggcaggagccacggagctggaggagctggctgagcagtatgag
gacatcatggaggactgtgggcatggacggttccagtggaccctgtttatagtgctgggc
ctagccctcatggctgacggggtggagtgctttgtggtggggttcgtgctgcccagcgcg
gagaaggacatgtgcttatccaatggagagaaaggcatgctaggtttgatagtgttcctg
ggcatgatggttggggcgttcatctggggaggcatggcagacaaactgggccgccggaag
tgtctgatctgggcactcaccatcaactgtgtcttcgccttcttctcctccttcgcccag
ggatatggcttctttctcttctttaggctcatctccggcatcggtattggaggttccgtc
cccatcgtctactcctacttctcagagttccttcagatggataagaggggggaacacctg
agctggctgtgtatgttctggatggtgggaggcatctatgcctccttcacagcctggggc
atcatccctcactatggctggggcttcagcatggggacagagttccagttccacagctgg
agggtgtttgtgctggtctgtgccctgcctgccatcacctccctggtggggctcatgttc
atgcctgagagccccaggttcctcctggagaatgccaaacatgacgaggcctggatgatc
ctgaagaatgtccatgacaccaactggagggcaaagggccagcctgagaaggtcttccag
gtgacacacatcaaggctcctaagacccaggaggatgagttcattgagatccagagtgcc
acagggacggctatgcagcgttgggccgtccggaccctcactctgtgcaaactggtgctg
aagaacgttgcttctctcttgggacctgagctgagactgagtacactgttcatggccatc
atctggttcaccatggccttcagttactatggactgggtgtgtggttccctgacatgatc
aaatcccttcagcaagaggagtatgagtccaaagtcaaggtgttccacagagagagagta
gaacgcttccacttcaacttctccctggagaatcagatccacagagagggagaatacatc
aatgacaagttcatcaacatacagatgaagtctgttaagtttgaggattcactgtttgaa
gattgttactttgaggacatcgagtccactgaaacaatatttgagaactgtaccatcaga
tccaccgtcttctataacacagatctgtatgaggaaaggttcatagactgtaggctggag
aacaccacattcctccataataagaagggttgtcacttggacatcgacgaggagaacgat
gtgctcctctacctggtcagcttcctggggtccctggctgttctacccggcaacatcata
tcagctctgttcatggagaagataggcagggttaaaatcataggcctctccatgctgatc
tcagctggctgcaccttcttcctgttcctgagcttcagtcaggcggccatcatagcctgg
cagtgtctgttctgtggggtcagcgtggcagcgtggaacggcattgaggtcatcacagtg
gaactttacccagcctccaaaagagccacagcgtttggggtgttgaatgctctctgtaag
ctggcggccatcctgggcacctccatttttgcctcctttgtgggggtcaccaaagttgtc
cccatcctcctctcctgtactgctctggtgtgtggaggtctggtggccctcaagctacct
gagacccgggagaagatcctccagtga
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