Oncorhynchus nerka (sockeye salmon): 115109282
Help
Entry
115109282 CDS
T07952
Name
(RefSeq) DET1 homolog isoform X1
KO
K10571
de-etiolated-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115109282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115109282
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115109282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
115109282
NCBI-ProteinID:
XP_029489888
LinkDB
All DBs
Position
LG25:complement(13995739..14004181)
Genome browser
AA seq
551 aa
AA seq
DB search
MEDDSPTLKPRRIQNQNVVHRLERRRIFSGRAGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAEDLLLGQDGETLANGNDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPSPHFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTSEGTFLDVRTIGRFCYEDDLLTLSAVYTEARAEGQPGFSRLYKEKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRQLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVMAVFENTSDKLLELFENFCDLFRNATLHSEAVQFPCSASSNNFAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgattccccaaccctgaaacccaggcgcatccagaaccagaatgtagtccat
cgactggagcggcggcggatcttctctggacgggctggagcccactggtaccgcgtgcgc
tgcttccaccagaaccttttccccaacttcactgtggtcaacgtagagaagcctccctgc
ttcctccgcaagttctccccagatggacgctgcttcatagccttctcctctgaccagacc
tccctggagatctatgagtaccagggctgccaggcggctgaggatctgctgctggggcag
gatggggagaccctggccaatggcaatgaccaacgctccctcaacatccgcggccgcctc
tttgaacgctttttttcattactgcacgtcactaatgtggcctccaatggagagcacctg
aaccgagagtgcagcctattcactgatgactgtcgctatgtgatcgtgggctcagcggtc
tatgtgcctgaggagccctctccacacttctttgaggtgtaccgcaacaatgagtctgtg
actcccaacccccgctctccactggaggactactcactgcacatcattgacctgcacact
ggccggctttgtgacaccaggtccttcaagtgtgacaagatcatcctctcgcacaaccag
ggactctacctctaccgtaacatactggctgttctttctgttcagcagcagacaatccat
gtctttcaggtgacatcagaggggacgttcctggacgtgcgaaccattggtcggttctgc
tacgaagacgacctcctcactctgtctgcggtgtatactgaggcccgggccgagggccag
ccaggcttctcccgcctctacaaggagaagaccatcaactccctgaagcacagactactg
gtctacctgtggagacgggctgagcaggacggcagcgccaccgccaagcgacgcttcttc
cagttctttgaccagctgagacagctgaggatgtggaagatgcagctactagatgagcac
cacctcttcatcaaatataccagtgaggacgtggtcaccctgcgagtcactgacccctct
cagccctcgttctttgtagtgtacaacatggtgagcacagaggtgatggcagtctttgag
aacacctctgacaaactgctggagctgtttgagaacttctgtgacctgttccggaacgcc
acactccacagtgaagctgttcagttcccctgctctgcctccagcaacaactttgcacgg
caggtccagagaaggttcaaagacaccatagtgaatgcaaagtatggcggtcacactgag
gctgtgaggaggctgctgggacagctgcccattagtgctcagtcctacagcagcagcccc
tacctcgatctttctctcttcagctacgacgacaagtgggtgtctgtgatggaacggccc
aaaacatgtggagaccaccccatcaggttttacgctcgggactctggcttgctgaagttc
aagatccaggcaggcctcctgggccggcccattaaccatgccgtccggcggctggtggcc
ttcacattccacccctttgagccgttcgccatctcagtacagaggaccaacgctgagtat
gtggtgaatttccacatgcgtcatgtctgtgtatga
DBGET
integrated database retrieval system