Oncorhynchus nerka (sockeye salmon): 115109304
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Entry
115109304 CDS
T07952
Name
(RefSeq) sphingomyelin phosphodiesterase 3-like
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115109304
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
115109304
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF4131
Motif
Other DBs
NCBI-GeneID:
115109304
NCBI-ProteinID:
XP_029489929
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All DBs
Position
LG25:14673591..14720556
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AA seq
673 aa
AA seq
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MVLHTSPYSSAFLRCLSSLSWGFIFPCYWLLDRLLSSCVATSLEKRRRSQDPCSFVTLYV
LVSTPLYLLLLLASLPFALLGFLLWATLQAARHPYLYTHRRPDKHQAEQGCVASLADWRP
QGRSFCFGSSNVCLLPDSLARFNNLSETQHRAREVGKRISNGASRPQIKIYIDSPTNTSI
SATSFSSLVTGFRRTSSLGQRPDNTPEAETEPVTDCPIHTAGSDCPIHTTGPNCPIHTAG
ADCPIHSKGDQGSSDCPVHVAGGEDTPECPLHTAGSQNNSDCPLHTTGAQNSPDCPMHAS
GVQISISAPEPDPPEAGNHQGEGDAESLTGGVSSNNTLSHRTSMFKKHTGRKRRQGDDGF
DHEISAFFPANLDFLCLQEVFDHRAMSRLRQQLHHYFPYILSDVGRYAWKGCCSRFKFLN
SGVMMASRYPILDAHYECYPNGRGEDALAAKGVLFVKVQVGTSHQEQRVVGYLTCTHLHA
IEGDAAVRCEQLDLLLVWGAEFRKMTSRPSEEKGLEDQVAFDVVLGDLNFDNCSSEDKLE
QQHAVFTQYKDPCRLGPGEDKPWALGTLLDTSGLYDEEVSSPESLQKVMENEEGRKEYLV
FPTNKNHCPNQKGRKIPLKGNGRRIDYILYREEVQQDWKVDIEEFSFITQLAGLTDHLSV
AMRLAVSTGEEEP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccacacctctccctactctagtgccttcctacggtgcctcagcagcctgtca
tggggcttcatcttcccctgctactggctgctggaccgcctgctgtcctcctgcgtggca
acctctctggagaagcgtcggcgctcccaggacccctgctccttcgtgacgctgtatgtg
ctggtgtccaccccgctctacctgttgctcctcctggcctcgctgcccttcgctctgctg
ggcttcctgctgtgggctaccctgcaggcggcccgccatccctatctctacacccaccgc
cgcccagacaagcaccaggccgagcaggggtgtgtggcgtcactggccgactggaggccg
cagggccgcagcttctgcttcggcagttccaacgtgtgcctactgcctgactccctggca
cgcttcaacaacctgtctgagacccagcaccgtgcccgcgaggtgggcaagcgcatcagt
aacggggccagccggccgcagatcaagatatacatcgactcccccaccaacacctccatc
agcgcaacctccttcagcagcctggtcacagggttccgacggacatcctccctgggccag
cggcccgacaacacacccgaggccgagaccgaacccgtaaccgactgcccaatacacact
gcaggttcagactgcccaatacacaccacaggtccaaactgccccatacacactgcaggt
gctgactgccccatacactcaaaaggggaccagggctcctcagattgtcccgtccatgta
gctggtggagaggacacaccagagtgcccccttcacactgctggttctcagaacaactct
gactgtccactgcacaccacaggggcccagaactccccagactgccccatgcatgcctcg
ggggtccagatcagtatcagtgccccagagccagaccccccagaggccgggaatcaccaa
ggggaaggtgatgcagagagcctgacagggggggtgtcttctaacaacaccctgtcccac
cgcacctccatgttcaagaagcacacgggtcgcaagcggcgccaaggcgacgacggattc
gaccatgagatctctgccttcttccctgccaacctggacttcctgtgtctgcaggaagtg
tttgaccaccgggccatgtccaggctgaggcagcagctgcaccactacttcccctacatc
ctgagtgatgtgggccgctacgcctggaagggctgctgctcccgcttcaagttcctgaac
agcggcgtcatgatggccagccgctatcccatactggacgcccactacgagtgctacccc
aacgggcgaggggaagacgccctcgcagcgaaaggagtcctctttgtcaaggtgcaggta
ggcacctcccatcaggagcaaagagttgtgggatatctcacctgcactcatctgcatgcc
attgaaggagatgcagctgtgcgttgtgagcagttggatctgctcttggtgtggggggcg
gagttccgcaagatgacgtcccgcccctcggaggagaagggtctggaggaccaggtggcc
tttgatgttgtcctcggcgacctcaatttcgacaactgctcctcagaggataaactggag
cagcagcatgccgtcttcacccagtacaaagacccatgtcgcctggggccaggggaggac
aagccttgggctctgggtacactactggacaccagtgggctttatgacgaggaggtcagc
tcaccagagagtttacaaaaagtgatggagaatgaggaggggaggaaggaatacctggtg
ttccccaccaataaaaaccactgtcctaatcagaagggcagaaaaatccccctgaaaggc
aatgggaggaggatcgactacatcctttacagagaggaggtgcagcaggactggaaagtg
gacattgaagagttcagcttcatcacccagctagccggcctcactgaccacctgtctgtg
gccatgcgtctggctgtgtccacgggagaggaggaaccttag
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