Oncorhynchus nerka (sockeye salmon): 115109340
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Entry
115109340 CDS
T07952
Name
(RefSeq) zinc finger protein ZFPM1-like isoform X1
KO
K17441
zinc finger protein ZFPM1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109340
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
115109340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FOG1-like_PR
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-H2C2_2
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
115109340
NCBI-ProteinID:
XP_029489999
LinkDB
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Position
LG25:15394606..15502471
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AA seq
1237 aa
AA seq
DB search
MSRRKQSKPRQIKRSTGDLEGDEDNTPDDVSLSGDEGGASDPEDSAECDSSSPPPYTPLY
IEEPRTHDCLGAPDDEDEEQKGPTHTEEEGEEMEEEEDGLHWRGPDDLELSDGTAGPKVL
ACRDLTTDTLWGPYTGIVQSEEAGDDQVPEQISRLTLVCEDDNGWLSRVPLTSDATAANC
TIYSQGEELYCKVTQDISTGDSLLATLSLSSVKQLSSSQTQDVVVKEEPTGVYPASLHSE
IQLLPQQAGMAAILATAVVNKDIFPCKDCGIWYRSERNLQAHLMYYCASRQKQQASSSPP
LDKAKESYPNERVCPFPQCNKSCPSASSLEIHMRTHSGERPFVCLICLSAFTTKANCERH
LKVHTDTQNGVCHGCGFVSTTRDILYSHLVTSHMVCQPGSCSEVYSPGPGLPKLPLSTGL
SPGDSGVVLKCQVCGHITDSPAQLQQHVRTHLEVRVPAERSPTPRQTTPSSADHPEHLDR
EPPACVPHPDSSSPGANGSSATPRGCSPPDQLPTDIRIKEEPHSDSENDGQEEETEGERV
EKSRGHRGTGSSQTSTSPRSPSAVAVKAEPTSPTPGSSPAHLGGAGSVLPGEDVFLPQYM
FSQEPAILPQASEILAKMSEMVHSRLKQGQVPPGAAPAFYPAGTTTTVQKGATCFECDIN
FNNINNFYVHKRLYCSSRHQQGDMAGPVKEGASGATVPSVGHGSSPQAGSGSRAASASPS
DSGPVPGSTATQGKLVEVKSENPGVKEAVSSSSSEGEGGGGGGRASECSQSPSGSAEDQE
DDPTRTFCQACNIHFSRHENYTVHKRFYCASRHDPSNQRSTAGKATFLPQPIRTRKRKKM
YEIHMARTEALANTAAASLSAPGLSLAVKQEAAASVERVLESPVPALALGLRPATSRSTS
PDRDGPIDLSKRPRLREAPRGSSIPSLPLTDYHKCTACSISFNSIENYLAHKAYYCPATT
LQPHTLETLHRLKRPASISPKSRALERSDVHSEAKGLLTEKAPRGASLSPHLSALPGSGS
EATSPYSVPAAKGPGSPSVVCPYCPPNRAVTCDLVEHFRSMHGLVLSLEGQPAVISPSLS
PRDGTPATPPKLVLRACRDSINGRIRRDTVSPSSPLVNGSPLGHHAGGGSSPNAAPPAVS
PTRSLPLTVSPVPEVLREVGVLNHQVAVTLLPDKASLTLGLPLPVPAPPTPKTLLIPPVQ
NGNTRFCRLCNIKFSSLSTFIAHKKYYCSSHSAEHVK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaagaaagcagagcaaaccccggcagatcaaacgttctactggggacctggaa
ggtgacgaggacaacacacctgatgacgtcagcctatcaggcgatgagggtggagcctcg
gacccagaggactcagcagaatgtgacagctccagtccaccaccatatacccccctgtac
attgaagagccaaggacacatgactgccttggtgcacctgatgatgaggatgaggaacag
aaaggtccaactcacacggaagaagagggggaggagatggaagaggaggaagacgggcta
cattggagaggtccagatgacctggagctaagtgacggtactgctggccccaaggttctg
gcctgcagagacctcaccactgacacactatggggaccatacactgggattgtccaatca
gaagaggctggagatgaccaggtgccagagcagatctccaggctgacgctggtgtgtgaa
gacgataacggctggctcagtagagtcccgctaacatccgatgccacagctgccaactgt
accatctacagtcaaggtgaggagctgtattgtaaggtgacccaggacatctccacaggt
gacagtctgttggccacactgtctctctcctccgtgaagcagctgtcctcgtctcagacc
caggatgtggtggtgaaggaggagcctacaggtgtctacccagcttctctccactctgag
atacagctcctcccccagcaggctgggatggcagccatcttggccacggcagttgtcaac
aaggacatcttcccgtgtaaggactgtgggatctggtaccgcagtgagaggaacctccag
gcccacctcatgtactactgtgccagccggcagaagcagcaggcctcctcctccccccca
ctggacaaagccaaggagtcctaccccaacgaacgtgtctgtcccttcccacaatgcaac
aagagctgcccgagcgccagctccctggagatccacatgcggacacacagtggtgagcgt
cctttcgtgtgtctgatctgcctgtcagccttcaccactaaagccaactgtgagcgtcac
ctgaaggtacacacggacacgcagaacggagtctgtcacggctgtggcttcgtctccacc
acgagggacattctctacagccacctggtcacaagtcacatggtgtgtcagcccggctca
tgcagtgaagtgtactcccccggccccggcctgcccaaactgcctctgtccacaggtcta
agtcctggagactccggtgttgtgttgaaatgtcaggtatgtggccacatcacagactcg
cctgctcagctccagcagcacgttcgcacacacctggaggtgagggtcccggccgagagg
agccccacaccccgccagaccaccccctcctcggccgaccaccctgagcaccttgacagg
gagccccccgcctgcgttccccaccctgactcctccagccctggggccaatgggagctca
gccaccccgcgaggctgcagcccacctgaccagctccccacagacatcaggattaaagag
gagccgcattcggactctgagaatgacgggcaggaggaggagacggagggggagcgggtg
gagaagagccgtggacacagaggtacaggctcctctcagacctccacctcccctaggagt
ccctctgctgtggctgtgaaggcagagccaaccagccccacccctggctccagccctgcc
cacctgggaggagctggctcagtgctccctggagaagatgtgttcctaccccagtacatg
ttcagccaggaaccagccatcctaccccaggcctcagagatactggctaagatgtctgag
atggttcacagccggctgaagcagggccaggtcccccctggggcagcgccagccttctac
cccgctggcactacaaccactgtccagaagggggccacctgcttcgaatgtgacatcaac
ttcaacaacatcaacaacttctatgttcacaagaggctgtactgctccagcaggcaccag
cagggagacatggctggcccagtgaaggagggggcgtcgggggccacagtcccatcagtt
ggacacggttcatcccctcaggctggatcaggtagtcgggcagcctcagcctcccccagt
gactcaggtcctgttccaggcagcaccgccacacagggcaagctggtggaggtgaagagt
gagaaccctggggtgaaggaggctgtgtcctcttcttcctctgagggggagggtggagga
ggaggaggccgggccagcgagtgcagccagagtcccagcggctcagcagaggaccaggag
gacgaccccaccagaaccttctgtcaggcctgcaacatccactttagccgccatgagaac
tacacagtccacaaacgcttctactgcgcatcgcgccacgatccgtccaaccagcggtca
accgcgggcaaagctaccttcctgcctcagcccatccgaacacgcaagaggaagaagatg
tatgagatccacatggctcggactgaggccctggccaacactgctgctgcctctctctct
gcccctggcctgagcctggctgtgaagcaggaggctgctgcctcagtggagagggtcctg
gagtccccagtcccagccctagctctgggcctgcgtccagccacctcccgtagtaccagc
cctgacagagacggccccattgacctgagcaagaggccccgtctaagggaggccccgcgg
ggcagcagcatcccttctctgcccctcactgactaccacaagtgtaccgcctgcagcatt
agcttcaacagcattgagaactacctggcccacaaggcctactactgcccagctaccacc
ctgcagccccacactctggagacgctccacaggctgaagagaccagcatccatctccccc
aagagcagggccctggagcgatcagacgtccactctgaggccaaagggctgctcacagag
aaggctcctcggggggcctcgctcagccctcacctctctgccttacctggctctggctct
gaggctacgtcaccttacagtgtccctgcagccaaaggcccaggctctccctctgtggtc
tgcccctactgccctcccaatagggcggtgacctgtgatctggtggagcacttcagatcc
atgcatggcctggtcctgagcctggagggccagccagccgtcatcagccccagcctgagc
cctagggatgggacccctgccaccccgcccaagctggtcctcagagcctgcagggacagc
atcaatggccggatcagaagggacactgtctccccatcctctcccctggtgaacggtagc
cccctgggacaccatgctgggggtggcagctcccccaacgcagcccctccagctgtgtct
cccaccaggtccctccccctgactgtgtcccctgtgcctgaggtgctgagagaggtgggg
gttctgaatcaccaggttgctgtcaccctgctcccagacaaggcgtccctcacactgggt
ctcccactccctgttccggcccctcccacacccaagacccttctgatcccccctgtgcag
aacggtaacacccgcttctgccgtctgtgcaatatcaagttcagcagcctgtccacgttc
atagcccacaaaaagtactactgttcctcccacagcgctgagcacgtcaagtga
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