Oncorhynchus nerka (sockeye salmon): 115109341
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Entry
115109341 CDS
T07952
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04020
Calcium signaling pathway
one04080
Neuroactive ligand-receptor interaction
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115109341
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115109341
04081 Hormone signaling
115109341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115109341
G protein-coupled receptors [BR:
one04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
115109341
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
115109341
NCBI-ProteinID:
XP_029490001
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Position
LG25:complement(15596130..15602713)
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AA seq
504 aa
AA seq
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MTENVSSRMDTPTNISLVGPGDPISQSLEYKTVAVFLVLLVCGLGIVGNIMVVLVVLTTR
HMRTPTNCYLVSLAIADLTVLVAAGLPNVSDSLTGTWVFGHAGCLGITYLQYLGINVSSC
SITAFTVERYIAICHPMRAQTVCTVSRAKRIIAGVWVFTCVYCMLWFFLVDIQVMKSGSI
QCGYKVSRDLYLPIYLIDFAIFYVIPLLLAIVLYGLIARILYLNPLPNRPDVGTASSGAT
MLRRSCKEPADGGKGGRQGRPKSTLSSRKQVTKMLSVVVILFALLWMPYRTLVLINSFIA
TPYLDAWFVLFCRICMYANSAINPVVYNLMSQKFRSAFRRLYRCQSQEAHHRTLSMIQSG
YSMARDPRTPQQTSNGTKQGARRVTCTDTVTEWQSKDTSPAKEKKDLDHLKEDRKDTSCG
EIKSTPQQTEINSTSGQTEIIFTPRQNEIKSTLGLNVIKSTPGQNEIKSTPGQNEIKSTS
VQNKIKSTPGPTEMTEAEMNHTVL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatgtgagctcaaggatggacaccccaaccaacatttccttggtgggacca
ggggaccccatatcccagtctctggagtacaagactgtggcagtttttctggttctgcta
gtctgtggacttggcattgtgggtaatatcatggtggttctggtggtcctcaccacgaga
cacatgcgtacgcccactaactgctacctggtcagcctggccatagcggacctgaccgtg
ctggttgccgctggtctgcccaatgtgtcagacagcctgacgggtacatgggtgtttggg
catgctggctgccttggcatcacctacctccagtaccttggcatcaatgtgtcctcctgc
tctatcacagcctttactgtggagaggtacattgctatctgccacccaatgagggcccag
acagtgtgcacggtgtcccgggccaagcggatcatagcaggggtgtgggtgttcacctgt
gtctactgcatgctgtggttcttcctggtggacatccaggtaatgaagagcggcagcatc
cagtgtggctacaaggtgtcccgtgacctctacctccccatatacctcattgactttgcc
atcttctatgtgatccctctgctactggccatcgtcctgtacggcctcatcgcccgcatc
ctgtacctcaatccactccccaaccggcccgatgtgggcacggcctcctctggtgccacc
atgctccgcaggagctgcaaggaaccagcagatggagggaaagggggtcgtcagggccgc
ccgaagagcacgctctcctccaggaaacaggtcactaagatgctctcagtggtggtgatc
ctgttcgctttactgtggatgccctaccggaccttggtccttattaactccttcattgcc
acaccctacctggacgcatggtttgttctgttctgtcggatctgtatgtatgccaacagc
gccatcaaccccgtagtgtacaacctgatgtctcagaagttccgttcagcgttccgcagg
ctctacagatgccagagccaggaggcccaccaccgcaccctctccatgatccagagcggc
tacagcatggccagggacccacgcaccccacagcagaccagcaacgggaccaaacagggg
gccaggagagtgacctgcactgacacagtgacagagtggcagagcaaagacacctcccca
gccaaagagaagaaggatctggatcacctgaaggaagatagaaaagacacaagctgtggt
gagatcaaatcaacacctcaacaaactgagatcaactccacatctgggcaaactgagatc
atattcacgcctaggcaaaatgagatcaaatctacacttgggctgaatgtgatcaaatcc
acacctgggcaaaatgagataaaatccacacctgggcagaacgagatcaagtccacatct
gtgcaaaataagatcaagtccacacctgggccaactgagatgactgaggcagaaatgaat
cacacagtgctgtag
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