Oncorhynchus nerka (sockeye salmon): 115109355
Help
Entry
115109355 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04115
p53 signaling pathway
one04120
Ubiquitin mediated proteolysis
one04137
Mitophagy - animal
one04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115109355
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115109355
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115109355
09143 Cell growth and death
04115 p53 signaling pathway
115109355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115109355
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115109355
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115109355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
115109355
NCBI-ProteinID:
XP_029490022
LinkDB
All DBs
Position
LG25:17444890..17464584
Genome browser
AA seq
334 aa
AA seq
DB search
MSGRANVQPVNSWKGVLKLFTCIATRTSNNPKEVPTFQEKKKALFGNLMDEEMSRQTATA
LPTGTSKCAPSQRIPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgtgcagcctgtgaactcatggaagggggtgctcaagctcttc
acatgcatagccactagaacatccaacaaccccaaagaggtccccacatttcaagagaag
aagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccacagcg
ctgccaacaggaacctccaagtgcgccccctcccagcgcatccccaccctgtccggcact
acagcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactatgtg
ctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccgtcccaag
ctcacctgctgccccacctgtcggggcccgctgggctctatccggaacctggccatggag
aaggtcgccaactctgtgctgttcccctgcaagtatgcgtcgtcgggctgcgaggtaacg
ctgccccacacagacaaggcggagcacgaggagctgtgtgagttccggccgtactcctgc
ccttgcccaggggcctcctgtaagtggcagggctcgttggacgcggtaatgccccacctc
atgcaccagcacaaatccatcaccacgctgcagggcgaggacattgtgttcctggctaca
gacattaacctgcctggagcagtggactgggttatgatgcagtcctgctttggtttccac
ttcatgctggtcctggagaagcaggagaaatacgacggccaccagcagttctttgccatt
gtgcagctaatcggcacgcggaagcaggcagagaactttgcctaccgcctggagctcaac
gggcaccggcgacggctcacctgggaggccacgccccgttccatccacgagggcattgcc
acggccattatgaacagcgactgcctggtgtttgacacctccatcgcgcagctgttcgct
gagaacgggaacctgggcatcaatgtcaccatatccatgtgctga
DBGET
integrated database retrieval system
