Oncorhynchus nerka (sockeye salmon): 115109378
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Entry
115109378 CDS
T07952
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115109378
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115109378
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115109378
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
115109378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
FAM92
DUF5955
Motif
Other DBs
NCBI-GeneID:
115109378
NCBI-ProteinID:
XP_029490062
LinkDB
All DBs
Position
LG25:complement(18444126..18571253)
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AA seq
1169 aa
AA seq
DB search
MCRLPVSCLLHDAHDEKDPLEGSPSRAVSTMSLSVRPSRRVISRSITRSQSFAGVNSYDK
PYRNLSVFSTPRVTRKPSRASRMFTLSAKSPPPKVPQPERLDEVYEALKRGLQSYLQVHQ
IELDSLSRQMRESKRNSRLGFLYELDKQVKVVERFMRRLEFHLSKIDELYEAYCMQHRLR
DGANKMVKAYTVSQGSREARESLSEANKGYKEYTENMCMLESELENQLGEFHVKMKGLAG
FARLCAGDTYEIFMKYGRQRWKLRGRMEINGKQVWDSEDMVFLPLITEFLSIKVTELKSL
ANHVVVGNVSCETKDLFAALPRTVAVDINDLGTIKLSLEVTWNPFDKDDQASAASTVNKP
PTVNKRFSTYNQSPPDTPSLREQAFYTAPRSLSRSMMSPNHRWSLLDVFRDTLAERLSQS
CSCSDVSSVHLGSANMQTDNMLRRQEEMENGTAWSNSSESSDDSSSPQLSLGLRHANKNL
VQLEVQAAAPSIEISFAPRDSATSTPTRLAKPENVQKEEPDTGAAGKEEDSGKQAVPNGQ
TRYSRSLSHISENSADGVLMDRSTCESVEPSEATSLQSGISINDIEMEMPARAESAPVPA
ETVVVGEPSEPLAPATVTMEESRPESRYSAGPIESDTGLEVVSGAVSAVEPELQSSAPTR
TDAVSQQGTSLDLRADSQAQTQSTEEISYTAHRAVVEEAEKPGPVVVANPTEGEKQQAVD
SEVEEALSAVIASLDDYRGQFPELQVLEQELRLLEETLTGHTCSCSSSVQSLAVETALGS
FDFLNTSDLEDEEEDEEKRSVTDGEHHSAPGRPPEESAGEDECCEERCWESHSSGPVSTG
CQALDHTLLVHLKNCSAQLLRLGTFGPLRCGEMYALDRLLREARVLELIRRVAKETPRGA
TQPDEVVPQLEQCQGATLLWQQCTDDGSVYSTSTDAFLTTLAAAYTNRLPERGISLADTV
FLRLVERILERRLPKRGGVVARDMLTLFQFWSYLEAEGVSDLDTHIIELAEEVWLVQSLQ
SGDQEVLVKALKRPPESSLKREGLHAVSLLLRDPRGKVSASASSLLRSLADHPRHRERAL
VSCLELLENESVETRVCGCKALACLKAKESIDQLVYLCRSDKEDVRDAAKQALLVLGEEG
KLAHRHVEISLQEGVPRLFSPGSMASTAF
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgcttacctgtttcctgtttactgcatgatgcccatgatgagaaggatcctctt
gaagggagtccctccagagctgtctccaccatgtccctttccgtgcgcccatcgcgccga
gtcatctccagatccatcactaggagccagtcctttgccggggtcaactcctacgataag
ccctacaggaacctgtcggtgttcagcaccccgagggtcaccaggaagccctccagagcc
agtaggatgttcaccctctccgccaaatccccaccgcccaaggtgccccagccagagagg
ctggatgaggtctacgaagctctgaagagaggcctgcagtcttacctgcaggtgcaccag
atagagctggacagcctgagccgacaaatgagggaatccaagaggaactctcgtctgggg
tttctctatgagctggataagcaagtgaaggtggttgagaggtttatgcgacggcttgag
ttccatctaagcaagattgacgagctgtatgaggcctactgtatgcagcaccggctgagg
gatggggccaataagatggtgaaggcctacacagtctcccagggcagccgcgaggccaga
gagagcctctctgaggccaacaaaggctacaaagagtacacagagaacatgtgcatgctg
gagagcgagctggaaaaccagctgggggagttccatgttaagatgaagggtctagcaggg
ttcgcacggctttgtgctggggacacgtatgagatctttatgaagtatgggcggcagcgc
tggaagctgaggggaaggatggagatcaatggcaagcaggtgtgggacagcgaggacatg
gtctttctgcctctcatcacagagttcctatcaataaaggtgacagagctgaagagcctg
gccaatcatgtggtagtggggaacgtgtcatgtgagaccaaagacctctttgctgctcta
ccccggacggtggctgtggacatcaatgacctggggacaatcaaactgagcctggaggtc
acctggaaccctttcgacaaggatgaccaagcctcggccgccagcactgtcaacaaaccc
cccacggtgaacaaacgcttctccacctacaaccagagtcctcctgataccccctcctta
cgggaacaggccttctatacggctccgaggagtctgtcaaggagcatgatgtccccaaac
caccgctggtccctgctggatgtgttccgtgacactctggctgagagactgtctcagagc
tgctcctgcagtgatgtctcctcagtccatctgggctctgctaacatgcagactgacaac
atgctgaggaggcaggaggagatggagaatggcacagcctggtctaactcctcggagtcg
tcagatgactcgtccagcccccagctgtccctggggctgcgtcatgccaacaagaatctg
gtccagctagaggttcaggccgccgcaccctccattgagatctcctttgctcccagagac
tctgccacctccacccctacccgcttagccaaaccggagaatgtgcagaaggaggagcca
gacactggagcagcagggaaagaggaggattctgggaaacaggctgtgcctaacggccaa
acacgttattcacgctccctcagccatatcagtgagaacagtgccgatggcgtactgatg
gacaggtcaacttgcgaatcagtggagccctctgaggccacctccctgcagtctgggatc
tctataaacgatattgagatggagatgcctgccagggcggagtcagcccctgtcccagct
gagactgtggtggtcggggaaccatctgagccactcgccccagctactgtcaccatggag
gagagcaggccagagagcaggtattctgcagggcctatagagtcagacacggggttagag
gttgtttcaggggctgtttcagcggtagagccagaactccagagctctgcacccactagg
actgatgccgtgtctcagcaaggtacctctctggatctcagggcagactcacaagcacag
acccagagcacagaggaaatatcatatactgcccacagggcagtggtggaggaggccgag
aagcctgggcctgtagtagtggccaaccccacagagggtgagaagcagcaggctgtggac
agtgaagttgaggaagccctgagtgcagtcatcgcctctctggatgactacaggggacag
tttcctgagttacaggtcctggagcaggagctcagactactggaggagacattaacgggc
catacatgcagttgttcgtccagtgtccagagtctggcggtggagacggctctcggcagc
tttgacttcctcaatacctcagacctggaggatgaagaggaggatgaggagaaaaggagt
gtgacagacggtgagcaccacagcgcccccggcaggccaccagaggagagtgcaggggag
gatgagtgctgtgaggagagatgctgggagtcccactcctctggacctgtgagcacaggc
tgccaggctctagaccatacactactggtccatctgaaaaactgcagtgcacaacttctg
aggctggggacctttgggcctctgcgctgtggggagatgtatgctctggaccgcctgctc
agggaggcccgcgtcctcgagctcatcagacgtgttgccaaggagacccctagaggagcc
actcagccagatgaggtggttccccagttagaacagtgccaaggggcaacattgctatgg
cagcagtgtacggatgatggcagtgtgtacagcacctccacagacgctttcctcacaact
ctggccgctgcttacaccaacagactgcccgagagaggaattagcctggcagacacagtg
ttcttgcgtctggtggagagaattctggagaggaggctgcccaagcgtgggggagtggtg
gccagagacatgctgaccctcttccagttctggagctacctagaggccgagggagtgagc
gatttggacacacacatcattgaactagcggaggaggtgtggctggttcagagcctgcag
tcaggggaccaggaggtactggtgaaggccctgaagaggcctccagagagcagcctgaag
agggagggcctgcatgctgtcagcctactgctgagggacccgcgggggaaggtgtctgcc
tctgccagctccctgctccggagcctcgccgaccatccacgtcatcgagagagggcccta
gtaagctgtctggagcttctggagaatgagagtgtggagacgcgagtgtgtggttgtaaa
gcacttgcatgtctgaaggccaaagagagcatcgaccagttggtctatctctgtcgatca
gacaaggaggatgtgagggatgctgccaaacaagcgctgctggtgcttggtgaggagggg
aagttggcccacagacacgttgagatatcactgcaggagggagtgccacgcctcttctcc
cctggcagcatggccagcaccgccttctaa
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