Oncorhynchus nerka (sockeye salmon): 115109405
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Entry
115109405 CDS
T07952
Name
(RefSeq) COUP transcription factor 2 isoform X1
KO
K08548
COUP transcription factor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109405
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115109405
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115109405
Nuclear receptors [BR:
one03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
115109405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115109405
NCBI-ProteinID:
XP_029490114
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Position
LG25:complement(19984659..19994641)
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AA seq
421 aa
AA seq
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MAMVVWRGSQDDVSETQGTLSSQSQGGLSLPTPQMNLSGSQVAPPTPQTTVQGPPNNTVQ
STPTNQTMQSEKQQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANR
NCPIDQHHRNQCQYCRLKKCLKVGMRREVSLFTAAVQRGRMPPTQPHHGQFALTNGDPLH
CHSYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFF
PDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIR
IFQEQVEKLKVLHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQY
PNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSI
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagtgtggagaggctcccaggacgatgtgtctgagacccaaggtaccctt
tcttcgcaatctcaaggaggactatcccttccgacccctcagatgaatctgtcaggctct
caggtcgcccctccgacccctcagacaaccgtccaaggacccccgaacaacactgtacag
tctacgccgacaaaccagacgatgcagtcggagaaacagcagccacagcacatagaatgc
gttgtttgcggggataaatctagtggtaaacactatggccagtttacttgcgaggggtgc
aaaagcttcttcaaacggagcgtacgaaggaacctcagttacacatgccgtgccaacagg
aattgtcccattgaccagcaccatcgcaatcagtgtcagtactgccgcctcaaaaaatgt
ctgaaagttggcatgagacgggaagtttctctttttactgcagcggtgcaacggggacgg
atgccacccacacagccacaccatggtcagttcgccttgacaaatggggacccactgcac
tgccattcctacttatccggatatatatctctactgctgagagcggagccctacccaacg
tcccggtatggcagtcaatgcatgcaacccaacaacatcatgggcatcgagaacatatgt
gaactggcggccaggatgctgttcagtgccgtggagtgggccaggaatatccccttcttt
ccagaccttcagattactgaccaggtggctcttctgcggttgacctggagtgagttattt
gtgctcaacgccgcacagtgctccatgcctctccatgtggctccacttctggcggcggct
ggcctacacgcctcccctatgtctgcggacagagtggttgcctttatggaccacattagg
atcttccaagaacaagtggaaaagctgaaagttttgcacgttgactctgctgaatacagc
tgcttgaaggcaattgtgctcttcacttcagacgcttgtggcctctcagatgtggcccat
gtggaaagtttgcaagagaagtcccagtgcgccctggaggaatatgttcggagccagtat
cccaaccagccaacacgatttgggaagttgttacttcgcttgccttcactgcgcacagtg
tcttcatcggtcatagagcaattgtttttcgtccgattggtaggtaaaaccccaattgaa
accctcatcagggatatgttgctttcggggagcagttttaactggccttacatgtcaatt
cagtaa
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