Oncorhynchus nerka (sockeye salmon): 115109414
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Entry
115109414 CDS
T07952
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K10373
tropomyosin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
one04814
Motor proteins
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115109414
04820 Cytoskeleton in muscle cells
115109414
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115109414
04261 Adrenergic signaling in cardiomyocytes
115109414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115109414
04147 Exosome [BR:
one04147
]
115109414
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
115109414
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of microglial cells
115109414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
DUF3450
EzrA
DUF745
PUMA_CC
CENP-F_leu_zip
Crescentin
Lebercilin
GAS
Motif
Other DBs
NCBI-GeneID:
115109414
NCBI-ProteinID:
XP_029490132
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Position
LG25:21671973..21691445
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDEISELEKKLRITEDERDKV
LDEFQAAEEKLLSAEEVATKAEADVASLNRRIQLVEEELDRAQERLTTALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQSEKYSHKEDKYEEEMKVLTDKLKEAETRAE
FAERSVTKLEKTIDDLEEKLAHAKEENLDMHQMLDQTLMELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgcttaagctcgacaaggagaatgctttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagttagag
gatgaaataagtgagttggaaaagaaattgcggatcaccgaagatgagagagataaagtg
cttgatgaattccaagccgccgaggaaaaattgctgagcgcggaggaggtggccaccaag
gctgaggccgatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctgacaactgccctgaccaagctggaggaggctgagaaggcagct
gatgagtctgagagaggcatgaaggtcattgagaacagagcctccaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgccgaggaggctgaccgc
aaatatgaggaggttgcccgtaagctggtcatcattgagagtgatctggagcgtacagag
gagcgcgctgaactttcagaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccagtctgagaagtactcacataaggaggacaag
tatgaggaggagatgaaggtcctcaccgacaagctgaaggaggctgagacacgtgctgag
ttcgctgagagatcagtaaccaagcttgagaagaccattgacgacttggaagagaaactg
gcacatgctaaagaggagaaccttgatatgcaccagatgctggaccagactctaatggaa
ctaaataacatgtga
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