Oncorhynchus nerka (sockeye salmon): 115109483
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Entry
115109483 CDS
T07952
Name
(RefSeq) cadherin-related family member 5-like
KO
K16505
cadherin-related family member 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115109483
Cell adhesion molecules [BR:
one04515
]
Cadherins
Cadherin related
115109483
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
TgpA_N
Motif
Other DBs
NCBI-GeneID:
115109483
NCBI-ProteinID:
XP_029490274
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All DBs
Position
LG25:24924203..24937852
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AA seq
961 aa
AA seq
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MMQPQRPCLSRWRVLLWSTLLLLSPLRVTGHPYTIVEDGLPWEAGSGDQTVRRENWNPCL
EGQDVFSTVRENSMMGELIIELNTELTANDVVWNLTGEDADWFFLEGRSIRLKAPLDRVL
DREVQGPVLMAALTCFEEDIVQSEYRIMVEILNENDNTPEFVESTIQPRSISELAEVNTV
VFTVQATDADDDTIMYSIDQTSPDAAYFRVDLPNSGEVILAKPLDYETKTQLEITISALE
INTAEKFNTSAILIVNILDRDDQYPHFLPCTPISNNQSNRVCTNPIYMVNITEGKQDILL
DFFPGPINAVDGDRGLSTPLSYSILSGADSGHFVMDELTGEVRLTRGVENRLQTPTLHLQ
VMAFQRNDPRKYSVATVVVRVVAVNHFPPQFSWPEYRGFVIEGDSPASLVNTYGNTVLLI
QTQDRDFSDGINPNMHYSLRSSSNHTQFYHITQEGLLIARTNQLWPSQTHSLKVVAVDLE
SGEMDTALIKVEVLFEGQTVPQGQLGDGLLPGSCAVGKAMGMVILGLTLLGCTLYALQHV
LQTYRGLKDPEDRGCIAQGKHPNVRLQCFQLVSHSSPMPVLDEVKFKKEGLSSSTSKLLG
SQSIYSPADFNSSPLNVLPTAIPSTTYIQPILPSTTPTDPSHCPASPNSSHTPATTTTPE
LLTTSTQPLDNSSFNTPTLPTPTPNLMDEPLSTDRFSHTHPFPIAEEVGTPTQVEETPKD
THPPTSPTQQQVHTPLPPPIPINSPPHATPPPTSITTPLPLSPAADPIHTPECKGDTHTP
LLTPPCPEQDSVGTPPPKPTTGQAHIPVLTTPTPEQVGPPGYPEKCKLSTHSPETASIWD
DDCFLGDEEAIRTSDDDEDEELVRLCFRVQPTFLITDYDNDITTEIPPSSGEDEGTENGE
GVERAMELMEGDKGGVERGSDYMEGKGGHLESEAESLKQGSQSSQPCNTEQEVSLGQSKE
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagccacagaggccttgtctgtccaggtggagggtcctgctctggtccacacta
ctcctcctcagtccgctcagagtcacagggcatccctatacaattgtagaagatggcttg
ccttgggaggccgggagtggtgaccaaactgtgagacgagaaaattggaacccatgtctg
gagggccaggatgtgttttccacggttagagagaacagcatgatgggagaacttatcatt
gagcttaacacagagctgacagccaatgatgttgtctggaacctaactggggaggatgct
gattggttcttcctggaagggcggagcatcagactcaaggccccattggacagagttctg
gaccgggaggttcagggcccagtcctgatggcagcgttgacctgctttgaggaggacatt
gtgcagagtgagtacaggatcatggtggagattctgaatgagaatgataacactcctgag
tttgtggagagcaccattcagcctcgcagcatcagtgagctggctgaggtgaatacagtg
gtgtttacagtccaagccacagatgcagatgatgacaccatcatgtactccatcgaccag
acctcgcctgatgctgcatacttcagagtggatctccctaacagtggagaggtgatactg
gccaagcctctggactacgagaccaaaacacaactagagattaccatatccgctttggag
attaacactgcagagaagttcaacaccagtgccatcctgatcgtgaatatcttggacaga
gacgaccagtacccacatttcctgccgtgcacgcccatctccaacaaccaatcaaatcgt
gtctgcaccaatcccatctacatggttaacatcacagaaggcaaacaggacattcttctg
gacttctttcccgggccaatcaatgctgtggatggagacagaggcctcagcacacctctc
agctacagcatcctgtcaggggctgatagcgggcatttcgtgatggatgagctgacaggg
gaggtgcgtctgacaagaggagtagagaacagactacagacacccacactacacctccaa
gtcatggcattccagaggaatgaccctaggaagtactcagttgccacagtggtggtccgt
gttgttgctgtcaaccactttcctcctcagttcagttggcctgaataccgtggctttgtc
atcgaaggcgacagccctgcctcactggtcaacacttacggcaacactgtgctgctgata
cagacacaggacagggacttctctgatggcatcaatcccaatatgcactactccctgagg
tcctcgtccaatcacacacagttctaccacatcacacaggaggggcttctgatcgccaga
accaatcagctatggccatcacagacacacagtctgaaggtagtggctgtggatttggag
tcaggtgaaatggacacggctctcataaaggtggaggtgctgtttgaaggacaaacagtc
cctcagggccaattgggggatgggcttcttcctggtagctgtgcagtgggcaaggctatg
ggtatggtcatcctggggctgactctgttaggctgcactctgtatgcactgcagcatgta
ctccagacatacagaggactgaaggacccagaggacaggggctgtatagcccaagggaag
caccccaacgtgagattacaatgcttccaactggtgagtcacagtagtcccatgccagta
ctggatgaggtgaaatttaaaaaagagggtctgagcagctccacctccaagctactgggc
agtcagagcatctacagtcctgcagacttcaactcttctccactcaatgttttacctaca
gctataccctcaacgacctacatccagcctatactacccagcaccactcctacagacccc
agtcattgccctgcttcacccaactcctcccatacacctgctacaaccaccacacctgaa
ctactcacaacatccactcaacccttggacaactctagctttaacacacccacactcccc
acacctaccccgaatctgatggatgaacctttatctacagacagattttcacatacacac
cccttccctattgcagaagaggtaggtacacccactcaggtagaagagactcctaaagac
acccacccacctacctcacctacccaacagcaggtacacacacctttacctcctcccatt
cctatcaactcacccccccatgccaccccacctcctacctcaattaccacacctctccct
ctttcacctgctgcagacccaatacacactccagagtgtaaaggagatactcacacacct
ttacttactccaccctgtccagagcaggacagcgttgggacacccccacctaaacccact
acagggcaggcacacatacctgtactgaccacgcccaccccagagcaggtaggaccacca
gggtaccctgagaagtgcaaactctccacacacagccctgagacagcttccatttgggat
gatgactgcttcctgggggatgaggaggccatcaggaccagtgatgatgatgaggatgaa
gagctggtgagactctgttttcgagtacagcccacattcctgataacagactatgacaat
gacatcactactgagatcccccccagcagtggagaggacgaggggactgagaatggcgaa
ggagtggagagagcgatggaattgatggagggagacaagggaggggtcgagagaggcagt
gattatatggaaggaaaggggggtcatttggagagcgaagcagagagcttgaaacagggg
agtcaatcatctcaaccctgtaataccgagcaggaagtatcattgggccaatcaaaggag
agatag
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