Oncorhynchus nerka (sockeye salmon): 115109485
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Entry
115109485 CDS
T07952
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00071
Fatty acid degradation
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04148
Efferocytosis
one04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
115109485
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115109485
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115109485
03320 PPAR signaling pathway
115109485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115109485
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
115109485
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115109485
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
115109485
NCBI-ProteinID:
XP_029490279
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Position
LG25:complement(25064710..25075715)
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AA seq
773 aa
AA seq
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MAEAHQAVGFQFTVTSDGIDLHLSREVLKHIYLSGVTSWTKRAIRFKNGILTGVYPASPS
SLLIVVIAILSTIYARIDPSLGMIDTIKRTMSVSGYMTVQTRTVLSAILFSTGLWLSLIL
MLRYILKALLSYHAWIFESHGKISFCTKLWLSLVKMFSGRRPLLYSFQTSLPRLHVPSVD
DTITRYLESVRPLLDDEQYNQMEVVANDFKKDQAPKLQKYLILKSWWATNYVSDWWEEYI
YLRGRGPIMVNSNFYSMDLLYVTPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRALGVV
PMCSYQMERMFNTTRIPGIETDFVQHLSDRKHLVVYHKGRFFKVWLYYGGRHLWPSELET
QFQRILVDTTEPQPGELKLAALTAGNRVPWARARLKYFSQGVNKASLEAIETSAFFLSLD
DEVHGYDPDKLRSLDLYAKSLLHGKCYDRWFDKSFTLIAYKNGKLGVNAEHSWADAPIIG
HMWEYVLATDCFHLGYTEEGHCKGDINKGLPPPTKLQWDIPLECQEVIEESYMVAKVIAD
DVDFHGCLFDEFGKGLIKKSRTSPDAFIQLALQLAQFRDKGEFCLTYEASMTRMFREGRT
ETVRSCTSESTAFVRAMEDKNTASAQKLDLFQKAADKHQNMYRLAMTGSGIDRHLFCLYI
MSKYLSTDSPFLKQVLSEPWRLSTSQTPQQQLNMVDIKKFPRYVGAGGGFGPVADDGYGV
SYIIIGENLITFHISSKFSSPETDSYRFGLNIRQAMLDIRALFDQKDKKEKEM
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcacatcaggcagttggcttccagttcaccgtcacctcagacggcatcgac
ctccacctgagccgcgaggtactcaaacacatctacctgtcgggagtgacgtcatggaca
aagcgcgccataagatttaaaaatgggatattgacaggtgtctaccctgccagcccatct
agtttgctgatcgttgtgatagccatattgagcaccatatatgccaggatagacccatca
ctgggaatgatagacaccatcaagaggaccatgtctgtcagtggctacatgacagtgcag
acccggacagtgctgagtgccatcctgttttccacaggcctgtggctctctctcatcctc
atgctgaggtacattctcaaggcccttctctcctaccatgcctggatctttgagtcccac
ggcaaaattagcttctgcaccaaactctggctgagtctggtgaagatgttctctgggcgc
agacctctcctctatagcttccagacctccctacccagactacatgtgcctagtgtggat
gacaccataaccaggtacctggagtcagtgcgccccctgctggatgatgagcagtacaac
cagatggaggtggtggccaatgacttcaagaaggaccaggcacccaaactccagaaatac
ctcatcctcaaatcctggtgggctactaactatgtgagtgattggtgggaggagtacatc
taccttagaggcaggggtcccatcatggtcaacagtaacttctactccatggatctgctg
tacgtgactcccacacacagacaggcagctcgggcagggaatgttgttcatgctatgctg
cagtaccgccgcaaactagagagaggagaacatgcaccgttgagggctctgggggtggtg
cccatgtgttcttatcagatggagaggatgttcaacaccacacgtatccctggtatagag
acagactttgttcagcacctgagtgaccggaagcacctggtggtgtaccataagggccgc
ttctttaaggtgtggctgtactacggggggcgtcacctctggccctctgagctggagact
cagttccagaggatcctcgtcgacaccaccgagccacagcctggggaactcaaactggct
gccctcacagccggcaacagagttccgtgggcgcgggctcgtctgaagtacttcagccag
ggtgttaacaaagcctctctggaggccatcgagacgtcagctttcttcctcagccttgat
gacgaggtgcatggttatgaccctgacaagctgaggtcattggacctgtatgccaagtcc
ctgctgcacgggaagtgctatgacaggtggtttgacaaatctttcactctgatcgcttat
aagaacggtaaactgggggttaatgcagaacactcgtgggcagatgctcccattatagga
cacatgtgggagtatgtcctagcaacggactgcttccatttgggctacacagaggaggga
cactgcaaaggagacatcaacaagggcctgcctccccccaccaaactacaatgggacatt
ccactggagtgccaggaggtcattgaggagtcctacatggttgccaaggtgatagctgat
gacgtggactttcatggctgtctgtttgatgagtttgggaaaggcctgatcaagaagagt
aggaccagtcctgatgccttcatacagctagcactacagctggcccaattcagggataag
ggggagttctgtctgacgtatgaggcctcaatgacccggatgttccgtgagggtaggaca
gagacggttcgctcctgcacctcagagtccacagcctttgtcagagccatggaggacaag
aacactgcgagtgcccaaaagttggacctcttccagaaggccgcagacaaacaccagaac
atgtaccgtctggccatgacaggctctggcatcgacagacacctcttctgtctctatatc
atgtctaagtacctcagcaccgactcaccattcctcaaacaggtgttgtcagaaccctgg
aggttgtccactagtcagactcctcaacagcagctcaacatggttgacataaagaagttt
cccagatacgtgggcgcggggggggggttcggccctgtggctgatgacggctatggcgtc
tcttacatcattataggagagaacctgatcacattccacatctccagcaagttttccagc
cctgagacggactcgtaccgatttggactgaacattcgacaggccatgctggatattcgt
gcgctattcgaccaaaaagacaagaaggagaaggagatgtga
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