Oncorhynchus nerka (sockeye salmon): 115109546
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Entry
115109546 CDS
T07952
Name
(RefSeq) class E basic helix-loop-helix protein 41-like
KO
K03730
class B basic helix-loop-helix protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109546
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
115109546
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Utp13
Oscp1
Motif
Other DBs
NCBI-GeneID:
115109546
NCBI-ProteinID:
XP_029490405
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Position
LG25:complement(30472322..30476337)
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AA seq
434 aa
AA seq
DB search
MDERIPRLQDRQFTDHEHFLGLEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQKIIALQNGDRSM
KTSIHADLDAFHSGFQACAKEVLQYLNKFENWNTREQRCAQLINHLHKVSAQFQPSAPLL
HSQQPAGDVLERDGQKAEIQAGHDRVSVIQRSHGELNENDTDTDSGYGGEAEKTDGNKGC
DRSKAVKIKQEFGDERAAKKTKMNWAGNGTTGADTTTRPDLAFMNSLMGITGVGQQTPFC
MPFYFINPSAAATYMPLFDKSNLEKFVYPAAAAAALSAPFPWLYPGLNSHASATAAAAAG
AFSGMSTEKSSGFGSNSKHSLSDDSDMSNVEPGSPEEREDNPENDVDYDDDDDYDDDVDD
DDDDDGIRERLPRQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaataccgcgtctgcaagacagacaatttactgatcatgaacatttttta
gggttggaatactcgtcactctacatgtgtaaatcgaaaagaggactgaagcgcgaagat
ggcaaggacgcgtacaagttaccacaccgattgatagagaagaagaggagagacagaatc
aatgaatgtatcggacagctgaaggatttgttacccgaacatctcaaattgacgacgctc
gggcatttggagaaagcggttgttctcgagttaactttgaagcatttaaacgcgttgact
gcagtcactgagcaacaacaccagaagattattgctttgcagaatggggatcgatcgatg
aagacgtccattcacgctgatttggatgcgttccactccgggttccaagcatgtgccaaa
gaggtcctgcagtacctcaacaagttcgagaactggaatacgcgcgagcagcggtgcgcg
cagctcatcaaccacttgcacaaagtatctgcgcaatttcagcccagcgcgccactgctc
cattcccagcaacctgccggagacgtgctggagcgcgatggccagaaagctgaaatccaa
gccggacatgaccgcgtatcggtcatacagaggagccacggggagcttaacgagaatgac
acagacacagacagtggatacgggggtgaggcggaaaagaccgatgggaataaaggatgt
gaccgtagcaaagcagtgaagataaagcaggagttcggggatgaacgcgcagccaaaaaa
acgaagatgaactgggctggaaacggtacgacgggcgcagacacgaccaccagacctgac
ctggcctttatgaactctttgatgggaataactggcgtgggacagcagactccattttgc
atgcctttttacttcatcaatccctctgcagcagcgacctacatgccgctattcgacaaa
agtaacctagagaagtttgtgtaccctgctgcggcagcagcagctctctcagccccgttt
ccatggttataccccggccttaactcacacgcttcggcaactgcagcggctgccgcaggt
gctttctccggcatgtcgacagagaagagctctggattcggttccaactccaagcactct
ctctctgacgacagtgacatgtcaaacgtggagccgggctcacccgaggagagggaggac
aaccctgagaatgatgttgattatgatgatgatgatgattatgatgatgatgttgatgat
gatgatgatgatgatggtattagggaacgactccccagacaatga
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