Oncorhynchus nerka (sockeye salmon): 115109555
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Entry
115109555 CDS
T07952
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115109555
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115109555
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
LMBR1
DUF16
Fez1
Phage_H_T_join_2
FlaF
Spc29
Motif
Other DBs
NCBI-GeneID:
115109555
NCBI-ProteinID:
XP_029490424
LinkDB
All DBs
Position
LG25:30935502..31024818
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AA seq
1005 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKSMDYSNSLFDCQSPTSPFLGSLRALHLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLEMCLDEHREKLNATEEMLQQELLCRTTLETQKLDLMAEVS
NLKLKLNSFEKDILHFDFRDSEDMGLEINELRYKVTEMESERLQYEKKLKSTKSLMAKLS
SLKIKVGQMQYEKQRNEHKLQALKEELVTLRRQLEGRDREVRRLHGETGFRANTPGGMDC
GDRVSHPDETLKKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLQRYKKVQDMV
MSVQEKKDKTKDGESDESNSDNFLSVMSTTTTPVALESERHALAGVEEVGVKSPDELETH
YGAPEVPLATTRPTVQSACALSVPELNQAEPERSLRVPKSASQENLYVSNSEKITLVIDE
KPTENKAVEDIGKISERPPRSPSSSRPEDDSFGTKKARSSFGRGFFKIKGGKRTASTPNL
AETVREGGTDHLDLAGLPQRSAISDSTNTLTSVTSTTSPEGKKKSRGIKALFGKLRRSQS
TTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNTDLDTPFARWSKEQVCDWLQE
QGLGLYLNMAHVWISSGQTLLQASQQDLERELGIKHPLHRKKLQLALQALGSEEDDNKGK
LDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDALLSLKVGSVLHHLSIKRAIQV
LRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLM
VLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQDYLENPDYTLLTATA
KVKLRKMTFGSFGSLRKKRQDESEEYVCPMDVEMPKGRSFQKGYELYEDDLDRLEQMEDS
EGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTDDDSNV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagctttggagcagatggatgggataata
gcaggctccaagtccatggactactccaacagcctgtttgactgccagtcaccaacctct
cccttcttgggaagcctgcgggcactgcacctgctggaggacctccggggcgtgctggag
ctgatggacaccgaggagagggagggccttcgctgccagatccctgatgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggccaccacatttccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gaaatgtgtctggatgaacaccgggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacgactctagagactcagaaactggacctaatggctgaggtgtcc
aacttgaaactgaagctgaactcatttgagaaggacatactgcactttgacttcagggac
agtgaggacatgggtctggagattaatgagctgaggtacaaagtgactgagatggagagt
gaaagactacagtatgagaagaaactgaaatccactaagtcgctaatggccaagctttct
agcctgaaaatcaaagtgggccagatgcagtatgagaaacagaggaacgagcacaaactg
caggcactgaaggaggagctggtgacgctgaggaggcagctggagggaagggacagagag
gtgaggaggttacacggcgagactgggttcagagccaacaccccgggtggcatggactgt
ggagacagagtctctcacccagatgaaactcttaaaaagaggctgaaagagaaacatgtg
gaagtgcagagaatgaaaaaagcggtggagtcactgatggcagctaatgaggagaaggat
cgtaagattgaggagctgaggcagtcgctgcagcgctacaagaaggtccaggacatggtg
atgtcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgatgagagtaacagc
gacaacttcctctctgtgatgtcaacgacaaccacccccgttgccctggagtcggagagg
cacgcgctagctggagtcgaggaagtaggagtgaagagcccagacgagctggagacgcac
tatggagctcctgaagtgcctttggcaacaacccgccctacagtccagtcagcctgcgct
ctgagcgtgccagagcttaaccaagctgaacctgagaggtccctgcgtgtcccaaagtca
gcgagtcaggaaaacttatatgtcagcaacagtgaaaagattacattggtgattgacgaa
aagccaacagagaataaggctgtggaggacatcggtaagatcagcgagcgcccgcccagg
tctccctcttcatctcgcccagaggacgacagcttcggtaccaagaaggctcgctcctcc
tttggccgaggcttcttcaagatcaaggggggcaagaggacagccagcacccctaacctg
gctgagaccgtgcgagaggggggcactgaccatctggacctggccgggctaccccagagg
tcagccatcagcgacagcaccaacacactgaccagtgtgacctccactacctctcccgag
ggcaagaagaagtccaggggaatcaaggcactctttggaaagctgaggagaagtcagtcc
accacgttcaacctggatgacaacctatcagagccggtcgagttcaagaggggcggagtc
cgggccacagcaggacccagactgggatggtcccgggacctacagcaatcacccaacact
gacctggacaccccgtttgcccgctggtccaaggagcaggtgtgtgactggctgcaggag
cagggactgggactctacctgaacatggcccacgtgtggatctcttctggacagactctg
ctgcaggcctcacagcaggatctagagagggagctgggcatcaaacacccgctgcacagg
aagaagctccaactggccctgcaggctctgggctctgaggaggatgacaataagggcaaa
ctggactacaactgggtgaccagatggctggatgacattggcctgcctcagtataagacc
cagtttgatgaagggagggtggacggccgcatgctgcactatatgacagtagatgccctg
ttgtctctgaaggtgggcagtgtgctccaccacctcagcatcaaaagagccatccaggtg
ctacgcctcaacaactacgagcccaactgcctgcgccgacggccctccgatgagaacaat
atcacaccagcagagatctcccagtggaccaatcacagagtaatggagtggctgagatca
gtagacctggcggagtacgcccccaacctgaggggcagcggcgtgcacgggggactcatg
gtgctggagcctcggttcaatgtggagaccatggccctgctgctgaacattccccccaac
aagaccctgctgcggaggcacctggccacccacttcaacctgctggtgggatctgaggcc
caggggctcaaacaggattatctagagaaccccgactacaccctgcttacagccaccgcc
aaggtcaagctgaggaagatgacgtttgggagctttggcagcctgagaaagaagaggcag
gatgagagtgaggagtatgtctgccccatggacgtggagatgccaaaggggcgtagcttc
cagaaaggctatgagctctacgaggacgatctggaccggctagaacagatggaggactcc
gagggaactgtgaggcagattggagccttctctgagggcatccaaaacttgacgagcatg
ctgaaagatgatgaattcttcaaagagatctcgaactctcccaaccccagcgtaacagat
gacgattccaacgtttga
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