Oncorhynchus nerka (sockeye salmon): 115109571
Help
Entry
115109571 CDS
T07952
Name
(RefSeq) teashirt homolog 3-like isoform X1
KO
K09236
teashirt
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109571
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115109571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_TSHZ3
zf-C2H2_2
Zap1_zf1
zf-C2H2_4
zf-C2H2
zf-C2H2_6
DUF7086
DUF7066
Motif
Other DBs
NCBI-GeneID:
115109571
NCBI-ProteinID:
XP_029490457
LinkDB
All DBs
Position
LG25:31839947..31863104
Genome browser
AA seq
1173 aa
AA seq
DB search
MPRRKQEAPKRAAAYSPEELEEMKEHAMEEVEEEGVDFQEDGEGSEKDLTKEALGDRDSI
VGAELSAQEMDIESHVSDASDPLSDFETTSVDAEERPVKEPLNGAGVRLDTPLALDTPLA
LDTPLALDTPLALDTPLALDTPLALDTPLALDTPLALDTLEQMKTIYSSFLTNTYWSPLN
FNPTPTPTQTLTHVEKPPRTSSSSSSSSSSSSYDWHQSAVAKSLQQQASQSRHHPHPSEP
SLFSTVQLHRQNPRLYGNIFTGASKFRCKGCSAAYDTLVELTVHMNDTGHYRDDNHERGA
NGAKGHWSKPRKRSLLEMEGKEDAAKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKE
PLAPVAAKMISRKRGPLSGSLDLPGSPSSREVTPTPKASLSGDPNDPSHKVSNPYITPSN
RFGHQNGASYAWQFESRKSQILKCMECGSSHNTLQELTAHMMVTGHFLRVTNGNPPSKRG
GRSVPEAASPSTVQATPPTQEGVQSIPLAPTFSPPPPSAVSALAISPPLKDIKKEEIEDE
CTKDMVSHDKVSGEEVEEKFHNSTKYNYLTEEDLKESPKGGFDILKSLENTVTSAINKAQ
SGNPSCGGYPSIHAAYQFPNSLKLPQGSAEKSSPLKYLFTGGEGVLSSLSKSQPLISPPT
SQSYPLPHLNNFQAMEELVKKVTEKVAKVERRVKREVSPKREVSPKREVSPKREVSPKRE
VHQPPCGSDAAESTGAESLLREWRAVTPANSDSSHSDRASPSARASRRKTVPLPASALSC
STAFITGHAPLEQPFVNPLSALQSVMNVHLGKAAKPTLPSQDPLSLLSRLSQSMAERAAV
ASSPTHTKRHPEPVACRGISQSNDDQPMDLTKGKRDRGGSMGSDPLTPSSTASSVSPSSM
VTPAKMTVVSPFTSSSPLHENALSDISDMLRNLTQSAHHVSKPPSRTRITERVTDVVGST
TQEEAAGSMANKRKGRQSNWNPQHLLLLQAQFSSSLRPTSEGKYIMSDLSPQERMHVSRF
TGLSMTTISHWLANVKYQLRRTGRTKFLKNLDSGQPVFFCSECASQIRTPAAYICHLEAH
LGFRLKDLAKLSPKQTLRDSSKGGSDELPLLDPFLFSSAPSSQSQEEGSGTVYRCQLCIR
KFASKHAIKLHLSKSHGKSPEDHLLYVSGMGKH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcggaaacaagaagcgcccaagcgcgcggcagcctactctccagaggagttg
gaggagatgaaggagcatgcgatggaggaggtggaagaagagggcgtggactttcaagag
gacggagagggctcagaaaaggacctcaccaaagaggcactgggtgaccgggactccatt
gttggggccgagctctctgctcaggagatggacattgaatcacacgtgagcgatgccagc
gaccccttgtcagactttgagaccacctctgtcgacgccgaggagaggcctgtcaaagag
cctctgaacggagcaggggtgaggctggacactcccttggcgctggacactcccttggcg
ctggacactcccttggcgctggacactcccttggcgctggacactcccttggcgctggac
actcccttggcgctggacactcccttggcgctggacactcccttggcgctggacaccctg
gaacagatgaagaccatctactccagcttcctgaccaacacttattggtcgcccctgaac
tttaaccccaccccaacgccaactcagacactgacacatgtggagaagccaccgcggact
agcagctctagcagcagcagtagcagcagcagtagttatgactggcaccagtccgcagtg
gctaagtccctgcagcagcaggcctctcagagccgccaccaccctcatccctcagagccc
agtctcttcagcacagtgcagctccatagacagaaccccagactgtacggcaacatcttc
accggggccagcaagttccgctgcaagggctgcagtgccgcctacgacaccctggtggag
ctcaccgtgcacatgaacgacacgggccattaccgcgatgacaaccatgagaggggagcc
aacggggccaaggggcactggtccaagcctcgcaagcgctccctgctggagatggaaggc
aaggaggatgctgcgaaggtgctgaagtgcatgtactgtggccactccttcgagtccctg
caggacctgagcgtccacatgatcaagaccaaacactaccagaaagtgcctctgaaggag
ccactggcccctgtggcagccaaaatgatctcaaggaagagaggcccactctctgggagc
ctggacctccctggctccccaagttcaagagaggtgacccccacacccaaagcctccctg
agtggtgaccccaatgacccctcccacaaggtctccaacccctatatcacccccagcaac
cgcttcggccaccagaacggcgccagctatgcgtggcagttcgaatcgcgcaagtcccag
atcctgaagtgcatggagtgcggaagttcccacaataccctgcaggagctgaccgcccac
atgatggtgactggtcacttcctccgggtcaccaatggcaacccccccagcaagagagga
ggcaggtccgttccagaggctgcctcccccagcactgtacaggccacaccccccacacag
gagggggttcagtcaatcccattggctcctacattctccccccctccaccctctgccgtt
tcagccctggccatctcccctcctctcaaagacattaagaaagaggagattgaggacgag
tgtaccaaggacatggtcagccatgacaaggtttcgggcgaggaggtggaggagaagttt
cacaactccaccaagtataactatctgaccgaggaggacctgaaggagagtcccaagggc
ggcttcgacattctcaagtccctggagaacacggtgacttcggccatcaacaaagcccag
agtggcaaccccagctgcgggggataccccagtatccacgctgcatatcagttccccaac
tccctgaagctgccccagggtagtgctgagaagagctcccctctcaagtacctattcact
ggaggagagggggtgctctcttccctcagcaagagccagcccctgatctccccaccgact
agtcagagctaccccctcccccacctcaacaacttccaggccatggaggagctggttaaa
aaggtgactgagaaagtggccaaagtggagcggagggtaaagagagaggtgtcccccaag
agagaggtgtcccccaagagagaggtgtcccccaagagagaggtgtcccccaagagagag
gtgcaccagcccccctgtggaagtgacgccgcagagtccactggagcagagtccctgctt
cgagagtggagggcggtgactccggctaacagtgacagtagccatagcgacagagcctcg
ccgtctgcgagagcgagcaggagaaaaacggttccgttgcctgcctctgctctgagctgc
agcacagccttcataacaggccacgcccctctggagcagcccttcgttaaccctttaagt
gctcttcaatctgtgatgaatgtccacctggggaaggcagccaagcccaccctgcccagc
caggaccctctcagtctgctgtccaggctgagccagagtatggccgagagggctgccgtg
gcctcctcccccacgcacaccaagagacacccagagcctgtggcttgtcgcggcataagt
cagtccaatgatgaccagcccatggacctgacaaaagggaagcgtgatcgagggggctct
atgggctctgaccctctgactccctcatccacagcctcctccgtctccccttcctcaatg
gtgacccctgctaagatgacagtggtctctcccttcacatccagcagcccgttacatgaa
aacgctctgtcggacatctctgacatgctgaggaacctgacgcaatcagcacaccacgtc
tccaagcccccctccaggacgcggatcacagagcgggtcacagatgtagtgggctccacc
acccaagaggaggctgcggggtccatggccaataagaggaagggccgtcagtccaactgg
aacccccagcacctgcttctcctacaggcccagttctcttccagcctcaggccgacatcc
gagggcaagtacatcatgtccgacctgagcccccaggagaggatgcacgtgtcccgcttc
acgggcctctccatgaccaccatcagtcactggctggccaacgtcaagtaccagctgagg
agaaccggcaggaccaagttcctcaagaacctggactcaggccagccggtgttcttctgc
agcgagtgcgcttcacagatccggacccccgctgcctacatttgccacctggaggcccac
ctgggcttccgactgaaggacctggccaagctctcccccaaacagaccctgagggactcc
tcgaaaggtgggtctgatgaactgcccctcctggaccctttcctcttctcttctgcaccc
tcttctcagtcacaagaggagggcagtgggactgtgtaccggtgccagctgtgtatccgt
aagtttgccagtaagcatgccatcaagctccacctcagcaagagccatgggaagtcccca
gaggaccatctcctgtatgtctctgggatggggaaacactag
DBGET
integrated database retrieval system
