Oncorhynchus nerka (sockeye salmon): 115109585
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Entry
115109585 CDS
T07952
Name
(RefSeq) ras and EF-hand domain-containing protein homolog
KO
K17199
Ras and EF-hand domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
one04031
]
115109585
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115109585
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rab Family
Rab45
115109585
Domain-containing proteins not elsewhere classified [BR:
one04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
115109585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
EF-hand_7
MMR_HSR1
EF-hand_6
EF-hand_1
GTP_EFTU
Gtr1_RagA
EF-hand_8
EH
EF-hand_5
CSTF1_dimer
FeoB_N
Motif
Other DBs
NCBI-GeneID:
115109585
NCBI-ProteinID:
XP_029490509
LinkDB
All DBs
Position
LG25:complement(33118644..33146942)
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AA seq
731 aa
AA seq
DB search
MAAFTSTPKVRSRSAPRHRDWDQSPAECDWKDCEAGGDERSTGHSTMLEKTQDFFQICDI
EDKGFITHRDMQRLHGQLPLSAEELENVFDTLDSDGNGYLTLQEFSSGFSEFLFGRRISV
TEGMGEASPIAKEANQGPPDSLYQTQWEERLMGSEDEEERHFCMLMESLGASNVFEEPGE
VRSLWAQLRRDEPHLLSNFEEFLARVTFQIKEANQEKREMESALKRKAATHDDEIQRLYE
EMEQQIKNEKDRILLQDSERFLSRSQDLEHQLSSKERELEQIFQKQRRLECQCRELHSEQ
HVTKVENVKLKQTNEDLAQELEHTSQELSLAQDQLGLLQEQSSRLHKEREREMYQVTEGL
QRERASLLKQLDLLREMNKHLRDERDMSSYQKLRNTVENPAWNPRPGSNTLNPFDKKAFK
CEEEVGLPHSKKSPGGVNGYSLEDVVASKPPNIPLQRIISIEEDHLPQLLQDDYHAQLCE
WSEEAEEEHIELQMNSIYPPSSLPTREQQPADTRESETPTSPRGQPVGKETVVNEVAAPP
PDRLFKIVLIGNSSVGKTSLLMRFCDDCFYPGTSATVGIDYSVKTITVDNSQVALQMWDT
AGQERYRSITKQFFRKADGVVVMYDITDEQSFTAVRQWLTSVQEGAGEDIPIMLLGNKTD
KESEREVQTRVGEKLAKDCQLIFYECSACSGQNVVHSLVHLARILKEQEDREKEKTVQLV
NGSSHKKRSCC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttcaccagtacccccaaagtgagatccaggagtgctcctcggcacagagac
tgggaccagagcccggccgagtgtgactggaaggactgtgaggctggaggcgacgagaga
tctacaggacacagcaccatgctggagaagacccaggacttcttccagatctgtgacatc
gaggacaaaggcttcatcacccaccgggacatgcagcggctccatggacagctgcccctc
agtgcagaggagctggagaatgtcttcgacaccctggattctgacggcaacggatacctc
accctgcaggagttctcctcagggttcagtgaattcctgtttggccgaaggatctctgta
acagaagggatgggggaggccagccccattgccaaggaagccaaccagggccccccagac
tcactttaccagacccagtgggaggagaggctgatgggcagcgaggacgaggaagagagg
cacttctgcatgctcatggagagcttgggcgccagcaacgtctttgaggaacctggtgag
gtgcgtagtctgtgggcccagctgagaagagatgagccgcatctcctgtccaactttgag
gagttcctggctagggtcaccttccagatcaaagaggccaaccaggagaagagggagatg
gagagcgcccttaaaagaaaagcagcaacacatgacgacgagatccagcgcttatatgaa
gaaatggagcagcaaatcaaaaatgagaaggacaggatcctcctgcaggactctgagcgc
ttcctgtctaggagccaggacctagagcatcagctctccagtaaggagcgggagctggag
cagatcttccagaaacagaggcggttggagtgtcagtgtcgggagcttcacagcgagcag
cacgtgaccaaggtagagaatgtgaagctgaagcagaccaatgaggatctggcccaagag
ctggagcacaccagtcaggagctgagcctggcccaggatcagctgggcctcctgcaggag
cagtcgtcacgcctgcacaaggagagggagagggaaatgtaccaggtcacagagggattg
cagagagagcgagcaagcctgctgaaacaacttgacctgctgagggaaatgaacaaacac
ttacgagatgaacgagatatgtcctcgtatcaaaaactgaggaatactgttgaaaatcct
gcttggaacccgaggcctggatcaaatactctgaatccctttgacaaaaaggcctttaaa
tgtgaggaagaggtagggctcccccactctaagaagagcccagggggagtgaatggctac
agcctggaggatgtggtagcctccaaaccccccaacatacccctacagaggatcatctcc
atagaggaggaccacctaccccagctcttgcaggatgactaccatgcccagctctgtgag
tggagcgaggaggcggaggaagaacacatagagctgcagatgaactcaatatatcctcca
agttctcttccgactagggagcagcagccagctgacaccagagagtcagagacgcctaca
tcccccaggggccagcctgtcggcaaggagaccgtggtgaacgaggttgcagcaccaccc
ccggaccgcctgtttaagatcgttctgatagggaactctagcgtggggaagacctccctc
ctcatgaggttctgtgacgactgcttctacccaggcacctctgccaccgtgggcatagac
tacagtgtgaaaacgataacggtggacaacagccaggtggcgctgcagatgtgggataca
gcaggacaggagaggtatcgcagcatcaccaagcagttcttccgcaaggctgacggtgtg
gtagtcatgtatgacatcactgatgagcagagcttcactgctgtgagacagtggctgacc
agtgtacaggagggggccggcgaggatattcccatcatgctgctgggaaacaaaactgac
aaggagagcgagcgggaggttcagacgagagtaggagaaaaattggccaaggactgccag
ttgattttctatgagtgcagtgcttgctctggacaaaatgttgtacactctctggtacat
ttggcaagaattctgaaagagcaggaggacagagagaaggagaagacagtccaactggta
aacggctcttcacataagaagaggtcctgctgctag
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