Oncorhynchus nerka (sockeye salmon): 115109613
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Entry
115109613 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109613
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115109613
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
bHLH_IRO3
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PLU-1
Motif
Other DBs
NCBI-GeneID:
115109613
NCBI-ProteinID:
XP_029490584
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Position
LG25:complement(34912296..34935913)
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AA seq
614 aa
AA seq
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MNICDCLMADQRMDITSTMNEFMSPSSSDLISSSVNTPGMDYTRKRKGSTSDYQIDGFSF
EECGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSHKLDKLTVLRMAVQ
HMKTLRGAANPYTEANYKPSFLTDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKIL
NYCQNDLIGQSLFDYLHPKDIAKVKEQLASSDTAPRERLIDAKTGLPVKTDITPGPSRLW
SGARRSFFCRMKCNRSYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDD
DNEPDNEGCNLSCLVAIGQLHPHIVPQPSHEDIRVKPTVYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVSCSMLDGADSSYPQSAVSPTASMDGVLTSEGGGRRALQT
VPGIPGGTRAGAGKIGRMIAEEVMETQRTRGSTPSTCGSSPLNISTPPPDCSPGGKRIQN
GTPDLPSAGTLPGGPDTVGYPYSNQSIMSDNSHLSIDEPGSSNDEAAMAVIMSLLEADAG
LGGPVDFSDLPWPL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgattgtctaatggcagaccaaagaatggacattacctctacaatgaat
gagttcatgtcccccagctccagcgacctgatcagcagctccgtcaacaccccaggcatg
gactacacccgcaagagaaagggcagcacctccgactaccaaattgatggattttctttc
gaggagtgtggtgatcaccagggccggataaaaaatgccagggaggcacacagtcagatt
gagaagcggcgcagggacaagatgaacagcttcatagacgagctggctgcactagtccct
acctgcaacgctatgtcccacaagctggacaaactcacggtcctacgcatggctgtccag
catatgaagacattaagaggagcagcaaacccttacacagaggcgaactacaagccgtct
ttcctgaccgatgatgaactgaagcacttaatattgagggctgctgacggctttctgttt
gttgttggatgtgatcgtgggaagatcctttttgtctcggagtcagtttacaagatcctc
aactattgccagaatgacctaattggccagagtctgtttgattacctgcatcctaaagac
attgccaaagtcaaggagcaactggcgtcatcggatacagcacctcgggagcggctcatt
gatgccaaaaccggtctaccagttaagacagacatcacccctgggccatctcgactgtgg
tccggggccagacgctcgttcttctgccgaatgaagtgtaaccggtcctatgtcaaaaca
gaggacaaggacttcccctccacctgctccaaaaagaaagccgaccgcaagagcttctgc
acgatccacagtactggctacctgaagagctggccgcccaccaagatgggcctggacgat
gacaacgagcccgacaatgagggctgtaacctcagctgcctggtggccatcggccagctg
catccccacatcgtcccccagccctcccacgaggacatccgcgtcaaacccaccgtctac
gtctcccgccacgccatcgatgggaagtttgtctttgttgaccagagggccacagccatt
cttgcatacttaccccaggagcttcttggcacctctttctacgagtatttccatcaggat
gatattggccacctggcagaatgtcacagacaagtgctgcagatgagagaaaagatcaac
acaaactgttataagttcaagattaaagatggctccttcatcactctgcgaagtcgctgg
ttcagtttcatgaatccttggaccaaagaggtggagtacatcgtctccacaaacacagtg
gtctcgtgcagtatgctggatggtgcagactccagctatcctcagtctgccgtctctccc
actgcctctatggatggtgtgctgacgtcagaaggtggagggagacgggcccttcagaca
gtgccaggcatccccgggggaacacgtgcaggtgccggtaagatcggtcgcatgatcgca
gaggaggtgatggagactcagaggaccagaggctcgaccccctccacctgtggctccagc
cccctgaacatcagcacccctcctccagactgctctccagggggcaagagaattcaaaat
ggaacgccagaccttccgtcggcagggacgctaccaggaggacccgacaccgttggatac
ccatactccaaccagtctattatgagtgacaactcgcacctcagcattgacgaaccaggc
tccagtaatgacgaggcagccatggctgtgatcatgagtctcctggaggctgatgcaggc
ctcggtggccctgtagacttcagtgacttaccctggcccttgtga
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