Oncorhynchus nerka (sockeye salmon): 115109620
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Entry
115109620 CDS
T07952
Name
(RefSeq) liprin-beta-2-like isoform X1
KO
K27096
liprin-beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115109620
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115109620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
DUF745
FxsA
AAA_13
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
115109620
NCBI-ProteinID:
XP_029490612
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All DBs
Position
LG25:complement(35278791..35403535)
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AA seq
1083 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERDTLRAQVPSSTAHMLMDWLDMDRYSERVSVNLCSPVNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHYHKLNSTEEMLKQELLSRTSLETQKLDLMD
EVSYLKLKLVDMDEEQNHNDSSEDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EAQGESGARKAYNQCPDVGLGGSDVEEFCCRCGGQNGFLQELRFLKSKVDELEGEKSQYE
KKLKATKLSISYSLHVCYQSLLSKLSSLKLTVEHTQVEKQHWEERWRTAQAEIADLQQML
ASKDSAIEGLQSQLVSRGPMTNENPERVEEVYRRQLTDKYQELQRLKMGMESLVATNYEK
DRHIEELTVLLGQYRKMKEVMALTQGSSEKLLVGSSEEELSGSLKMRALTHKAHSDIIRS
AMSSRGSSPLLVSPSSFQKELDSSCRSIQTSLETSMVMVSQSDAGCFYTGEWSQQRMLSS
SLEELQSGSLPKHVVVGQPVEPVSENQHIEMNKYQTLPGKLSRPDMNGDREQCSTPDQLS
PDDSEDSEFHLRKSERLDESTLSDLSPLSSGVDSGQQSPVSPENKKNHRGIKKLWGKIRK
TQSGSLQGEDLEPGEFKRGGLRATAGPRLARAGETLTSVRDLKTPFSKWTPEQVCCWLEE
YGLGQYVILARHWADSGQTLLSASPQDLEKEMGIKNPLHRKKLQLALKSFSTKLTEKSSE
LDHIWVTRWLDDIGLPQYKDQFHQGRVDGRMLQYLTVNNLLFLKVTSQLHHLSVKCAIHV
LHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLI
ILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNMLVGSQAQQEKREFMESSGYTPLSTTA
KVRPKKLGFSNFGHLRKKRCDDSTDYICPLEAAQAQAQLQAVVNGAHRPYSGFRGLSPIL
DRDPDRREQPSSMLLIIMIGPLYARWRSACWNRTIPSCTLGGGAQPSADGGDRGDRTADR
SSF
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatt
gcaggctccaaggctgcagccgagtacaccaacggcctgtttgagctgggctccccgggc
agcgcgggacccctgcaggtgctgcagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagagggacaccctgagggcccaagtccccagcagcaccgctcac
atgctcatggactggcttgacatggacaggtattcagaaagggtctcggttaacctctgc
tccccggtgaacaatgagagctatcaggagcggctggttcgcttagagggggacaaagag
tctctggtgctccaggtgagcgtgctcacagaccaagtggaggcccagggagagaagatc
cgagacctggagagctctctggaggagcactaccacaagctcaactccactgaggaaatg
ctaaagcaggagctgctgagccggacctcattggagacccagaaactggatctgatggat
gaggtttcctacctgaaactgaagctggtcgacatggatgaggaacagaaccacaacgac
agcagcgaggaccagcagaacaaagctgagtgtgtggtaaatctgattagcgagctccag
gagcagatgtgtaggtttcaggaggagatccatacccggatcatggagaaacgggccatg
gaggcccagggggagagtggtgcccgcaaggcctacaaccaatgccccgacgtgggcttg
ggtggctctgacgtggaggagttttgctgtcgctgtggaggacagaatggcttcctgcaa
gaactccggtttctcaagagtaaagtggatgagctggagggggagaaatcgcagtatgag
aaaaaactaaaggccacaaagctgtctatctcttactctctccatgtgtgttaccagtcg
ctcttgtccaagctctctagcctgaagctcactgtagagcacactcaggtagagaagcag
cactgggaggagcgatggcggaccgctcaggcggagatagcagacctacagcagatgctg
gcttccaaagactctgcgattgagggcctacagagccagctggtctccagaggcccaatg
accaatgagaacccagagagagtagaggaggtgtataggagacagctgacagacaaatac
caagaattgcaaaggttgaaaatggggatggagtctttagtagcaactaattatgagaaa
gaccgtcacatagaggagctgactgttctcctgggccagtacaggaagatgaaggaggtg
atggccctcactcaagggtccagtgagaagctcctggttgggagcagtgaggaggaactg
agtgggagtctgaagatgagggctctcacccataaagctcattcagacatcatccggtca
gcgatgtcttctagaggctcctctcccctgttagtgtctccctcgtccttccagaaagag
ctggactccagctgccgcagtatccagacctccctggagacgtcgatggtgatggtctcc
cagagtgatgctggttgcttctacactggagaatggtcccaacaacggatgctttcaagt
agcctggaggagttacaaagtggatcgttaccaaagcatgtcgtggtgggtcaaccagtt
gaaccggtttcagagaatcagcacatcgaaatgaacaaatatcagaccctaccagggaag
ctgtctcgacctgacatgaatggggatcgagagcagtgttctacgccagaccagctgtcc
cctgacgatagcgaggacagtgagtttcacctaagaaagtcggagagactggatgagtcc
acactgtcagacttgtctcccctgtcgtctggagtggactcaggacagcagtcccctgtc
tctccagagaacaagaagaaccaccggggcatcaagaagctctggggaaagataaggaag
acacagtctggcagcctgcagggagaggaccttgaacctggagagtttaagaggggggga
ctgagagccaccgccggccctcgcctggcccgggccggagagacattgacctctgtgcgg
gatctgaagacgcccttctccaagtggactccggagcaggtgtgttgctggctggaagag
tatgggctgggccagtatgtgattctggcccgacactgggccgacagcgggcaaactctc
ctctctgcctcaccacaggatttagagaaggagatggggattaagaatccactgcacaga
aagaagctgcagttggccctgaagtcgttcagcaccaaactgacagagaaatcgtctgaa
ctggaccacatctgggtcacacgttggcttgatgacattggtttacctcagtacaaggat
cagtttcaccagggaagggtagacggcagaatgcttcagtacttgacagtgaacaacctc
ttgttcctgaaagtgaccagtcagctccatcacctcagtgtgaagtgtgctatccacgtc
ctccacgtcaacaagttcaaccccaactgcctgaagagaaggcctggagatgagaacaag
acgtctccctcggaggtggttcagtggtctaaccacagggtgatggagtggcttcgctcg
gtggacttggcggagtacgctcccaacctgagaggcagcggggtgcatgggggccttatc
attctggagcctcgttttaactcagacaccctggccatgctgctcaacatcccccctcag
aagaccctgctgcgacgccacctggccaccaacttcaacatgctggtgggctcccaggct
cagcaggagaagagggagttcatggagtcgtctggctacactcccctcagcaccacagcc
aaagtcaggccaaagaagttgggcttctcaaacttcggccacctgaggaagaagagatgt
gacgactcgactgactacatctgccccctggaggcggcccaggcccaggctcagctccag
gcggtggtgaacggggcccaccggccctactccggctttaggggcctcagcccaatcctg
gacagagacccagacagacgagagcagccctcatcaatgcttctgatcatcatgattggc
ccattgtatgcaagatggaggagtgcatgttggaacaggactatcccatcatgcaccttg
gggggaggggctcaaccatccgcagatggcggtgacagaggggaccgtactgcagataga
agctctttctga
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integrated database retrieval system
