Oncorhynchus nerka (sockeye salmon): 115109627
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Entry
115109627 CDS
T07952
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109627
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115109627
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SSDB
Ortholog
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GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115109627
NCBI-ProteinID:
XP_029490646
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All DBs
Position
LG25:36084974..36100815
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AA seq
468 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAIYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEK
QQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNTDGCPPSDGGGENTNSISSNG
EDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQPTTPGWISFSSGS
MLGRPDTALTNTYSALPPMPSFTMANNLPMQAPVPSQTSYSCMLPTSPSVNGRSYDTYTP
PHMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgttgcgtccatgatg
caaaacaaggtgtatgacatctgtaacgaaggtcacagcggagtgaatcagcttggcgga
gtgttcgtcaacggcagacccctgcccgactcaaccagacagaaaatagtcgagcttgct
cacagtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaa
gtccaagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcaga
tactatgaaactggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagca
actcccgaggtggtcggaaaaattgccatatacaagagggagtgcccgtcaatcttcgcg
tgggaaattcgtgacagactgctttcggagggggtctgcacaaacgataatatacccagt
gtaagttcattgagtgtgtcatcgataaacagagtactgcgcaacctggctagcgaaaag
caacagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactggg
acgtggggaacccggccgggctggtaccccggaacctcagtgccaggacaacccaacaca
gatggttgcccaccgtcagacggtggaggtgagaacactaattcaataagttcgaatgga
gaagactcggatgagacccaaatgagacttcagctgaaaagaaaattgcaaaggaaccgc
acttcgttcacacaagaacagatagaagcgctcgagaaagagtttgaaagaactcactat
ccagatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaata
caggtgtggttttcaaatagaagggcaaagtggaggagagaggagaaactccggaatcaa
aggcggcaagccagtaactcctccagtcacatccctatcagcagcagtttcagcaccagt
gtctaccagcccatcccacagcccacgacaccaggttggatatcgttctcgtcaggatcc
atgttgggaagaccagacacagcccttacaaacacatacagtgccctgccacctatgcca
agcttcaccatggccaacaacctgcctatgcaagctcctgtgcccagccagacctcctac
tcctgcatgctgcccaccagtccctcagtcaacgggcggagctacgacacgtacacccct
cctcatatgcaggcacatatgaacagccagtcaatggcaggctcaggaggcaactcaaca
ggtctcatctctcctggagtatctgttcctgtccaagtgccaggcagtgaagcagacatg
tcccagtactggcccaggctacagtag
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