Oncorhynchus nerka (sockeye salmon): 115109641
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Entry
115109641 CDS
T07952
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3-like
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
one04148
Efferocytosis
one04218
Cellular senescence
one04310
Wnt signaling pathway
one04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115109641
04310 Wnt signaling pathway
115109641
04020 Calcium signaling pathway
115109641
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115109641
09143 Cell growth and death
04218 Cellular senescence
115109641
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
115109641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109641
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
115109641
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
115109641
NCBI-ProteinID:
XP_029490686
EnsemblRapid:
ENSONEG00000013492
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Position
LG25:complement(37084488..37124235)
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AA seq
1061 aa
AA seq
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MTTVNCSGNEELDFRLIFGEDAQQLGPAGPDPGDSTPYYTTQSMVNQPIGQAQDLQQSQQ
HHQAASQQAPLQTYGNYHPSSSYEVHSSRYWPMGHLPKAFDCPSIQITSISHSHQELGSS
QDAVPISGADGGGECGRERSWSRDHLYLSLDPCYRDSSSLNPSPCSSLSSRSWLSDVSSC
ESFSHVYDDVEAELNEAAARFTMGSPLASPLASPGCSPQGQAAGGFGVELWQQQYFMNTH
SLSPHQSPRQSPRQSPCHSPRNSVTDENWLNPRPTSRSGSRPTSPCGKRRHSSADVYGQG
PSPSPSPHQSPCPTPSHSPRGSITEDTWAVGSPGAMGALLYNLPEVDVPSKTRRTSQQAH
MGLLHGQGDSGLVPEDQGVVLPHLDSPADESGSTLKQDGLFEELFLSVPSHFTWNKPKPG
NTPLFRTSSLPPLDWPLPSQFGQCELKVDVQPRGHHRAHYETEGSRGAVKAASGGHPVVK
LIGYNEKPVNLQIFIGTADDRYLRPHVFYQVHRVTGKTVATACQESVISSTKVLEISLLP
ENNMSTSIDCAGILKLRNSDIELRKGETDIGRKNTRVRVAFRVYIPQPSGKVLCLQAASI
PVECSQRSATDLPQMQSCSPLSCLVSGGGEMVITGSNISPESKVIFLEKGPDGRTQWEVD
GKVIRDKSKRSRIVVEIPTYHNTTVSSAVQVQFYVCNGKRRRSQRQNFTYLAGASPHHYP
TASDHAVVAPRVKQELTDSTYLSTCNNLPGLYPTSSKQNSSDGAFSQDRPLYGSSGGHPV
PCGPPSQPAYTPSGSSPLQHSPHLHSYSPSMGYQRISPMHTPDSMPPPRTKPVYQATQHN
VPYSGQASSPMRPGPAAFQVIRPQSAQPRPAVSSPHRESVMYQSLIGPDLSVATLQSART
HTQNATQLQSLKYHFSHSDSDLAALQAEYNLSYHSDKNLPASYSPTPGVAATCSTSPLAL
ASSGGPLRHLSPSSAQGLASGIDPQECPPAPHSLFSNDRGRMNIKQEPEEKLPLGSMGLQ
EITLDDVNEIIDRDISQLGGGAAESNQPEQDTYGWDTVILQ
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgactactgtaaattgtagcggcaatgaggaactggacttcagacttattttcggagag
gacgcgcaacagctaggccccgcaggtccagaccctggtgacagcacgccatactatacc
acccagtctatggtcaatcagcctattggccaggcccaagacttacaacagagccagcag
caccaccaagctgcttctcaacaagctcctctccaaacctatggtaactaccaccccagc
tccagctatgaagttcacagttccagatactggcccatgggacacctccccaaggcgttc
gactgcccaagcatccagatcacatctatcagtcacagtcaccaagagctgggctccagc
caggatgccgtgcccatcagcggggcagacggcgggggtgagtgcggtcgtgaacggtcc
tggtccagggatcacctctacctatccctggacccctgttacagggactcatcgtccctg
aaccccagcccttgcagcagcctgtcctccaggagctggctgtccgacgtgtcctcctgc
gagtccttctcgcacgtttacgacgacgtggaggctgagctgaacgaggcggccgcccga
ttcaccatgggttccccgctggcctctcccctggcctcccctggctgctccccacaaggc
caggccgcggggggattcggggtagagctgtggcagcagcagtacttcatgaacacccac
tccctctcgccccaccagtcccctcgccagtcgccccgtcagtccccctgtcactctcct
cgcaacagcgtcacagacgagaactggcttaacccgcgccccacctccaggtccggctca
aggcccacatcaccttgtgggaagagacgacactccagcgcagacgtctacggacaggga
ccttccccctccccatcccctcatcagtccccctgccccacccccagccactctcccagg
ggcagcataacagaggacacctgggcggttggaagccctggtgccatgggggccctcctg
tacaacctccctgaggtagatgttccctccaaaaccaggaggacctctcagcaggctcac
atgggtctactgcatggacagggagactcagggctggtgcccgaagaccaaggagtcgtg
ttgcctcacctggactcacctgcagatgagtctgggtctactctaaaacaggatggcctt
tttgaagaactctttctctcggttccctcacacttcacctggaacaaacccaaacctggc
aacacaccccttttcaggacctcctccctacccccactggactggcccctgcccagccag
tttggccagtgcgagttgaaggtggatgtgcagccacggggccaccacagggcccactat
gagacagaggggagtcggggggccgtcaaggctgcctcaggaggacaccctgtagtcaag
ctcattggatacaacgagaagccagtcaacctgcagattttcataggaacggcagacgat
cggtacttgagaccacatgtcttctaccaggtgcacagagtaacgggaaagacggtggct
actgcttgccaggaaagcgtaataagcagtacaaaggttctggaaatctctctcctcccc
gaaaacaatatgtccaccagtattgactgtgcaggcatcctgaagctgaggaactctgac
attgagctcaggaagggggagactgacatcgggaggaagaacacgcgtgtgcgagtggca
ttccgtgtgtatatccctcagcccagcggcaaggtcctgtgtctgcaagctgcctctatt
cctgtggagtgctcccagcgctcggccacagaccttccccagatgcagagctgcagtccc
ctcagctgcttggtcagtgggggtggggagatggtaattactggctccaacatatccccc
gagtcaaaggtcatcttcctggagaaaggccctgatggacgcacacagtgggaagttgac
ggaaaagttattcgagacaagagtaaaagatccagaatcgtggttgagattcctacctac
cacaacaccactgtgagctctgcagtccaggtgcagttctacgtgtgcaacgggaagagg
agaagaagccaaaggcaaaacttcacatacttggctggtgcttctccacaccattatccc
actgccagtgaccatgcagttgtggctcctcgggtgaagcaggagctcactgactcaacc
tatctgtctacttgcaacaatctccctggcctatatccaacaagcagcaagcagaattct
tctgacggggccttctctcaggacaggcccttgtatggttcctctggtggtcaccctgtg
ccttgtggtccgccctcccagccagcatacactccctcaggctcctcgcctcttcagcac
tcccctcacctccacagctacagtcccagtatgggataccagcgtataagccctatgcat
acacctgattcaatgccaccccctcggacaaagcctgtctaccaggccacacaacataat
gtgccttatagtggccaggccagctctcccatgagacctggtcctgccgcattccaggtc
attcgacctcagtctgcccagcccaggccagctgtctccagccctcatagggaaagtgtg
atgtaccagagcctcattggacctgatctctctgttgccactctccagtctgccagaacc
cacacccagaatgcaacccagctgcagtctctaaaataccacttttcccactcagactct
gacctagcggctctacaggctgagtataatctgagctaccattctgacaaaaacttgcct
gcttcgtattctcccactcctggagtagcagcaacctgctccacctccccgttagcatta
gcctcctctgggggtcccttgaggcacctgtcccccagcagcgctcaggggctggcctct
ggtatcgacccccaggagtgtcccccggcaccccattccctcttctcaaacgacagaggg
aggatgaacatcaagcaggaaccagaggagaagctgcctcttggctccatgggactccag
gagatcacactagatgatgtgaatgagatcatcgatagagacatatctcagctcggtggc
ggagcagcagagtccaatcaaccagaacaggatacttatggatgggatactgtgatactc
cagtga
DBGET
integrated database retrieval system
