Oncorhynchus nerka (sockeye salmon): 115109655
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Entry
115109655 CDS
T07952
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115109655 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115109655 (nup160)
03036 Chromosome and associated proteins [BR:
one03036
]
115109655 (nup160)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115109655 (nup160)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115109655 (nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_NUP120_160
TPR_1
TPR_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
115109655
NCBI-ProteinID:
XP_029490713
LinkDB
All DBs
Position
LG25:complement(38053599..38079080)
Genome browser
AA seq
1391 aa
AA seq
DB search
MAAVLERSFIEICGFERETLPRFREITVNLGLNSLPGGVKYPDSAGGFHYEESGKLLSIT
SNRCIHWSTSGDTVQLVEQSLDTNLLNNAVKLKITHCHLLPGGVHIQETLNNVIILIVTN
QTVHRLVLPHPTRMYRSELVTELQMQSIFTDVGKLSLQDPAHSAAIPSPVGQTAGPSASA
AWLSHQGEAHYALASPAGGILVITLPPHDTQGSITILELKRSSVMQRLAGWMPTAIRGEQ
SPGDLALSLAVRELEDDTFIFALCQDHKLRMWSYRDQVCLMETDMLEYMPACRGVKGSPG
QGHRLRLAFSPSTGLCLAVYLAVPSRGQFTVLQLVATDNNRYSLDHISSLFATQETLVDF
ALTSTDIWGLWLDDTNQTVVKYINFEHSTAGQWNQVFVQPAPEEEVHIGADQDPRETYLD
MLFSPLRFTASAIVKALQIYRRGTERIADLPWETLKKEVTVAVENELQSSVTEFEFSQEE
YRQLQVEFWSKFYACCLQYQEALATPLGLLLNPHTHMVCLLKKGFVSFLLPCFAVDHMYL
SFDEYLFSEEDTPVSEDPEVARDVMQLVQCLRLVSDAVPGDMAYEMEKALEHLQSPERAA
EMVLENLLANDNENVIEDIQNKLQDIRNPVSAMAVLIREMDLETDSEPGGEGPLTTAGLS
VRISLSQLYGSSVAVAVICQAVCQMAMTRVLFCRDLLILQQLYLRLGDNVFLAGGDQLLQ
LQQDLIPRSSHLLSSYYLLKHISQSLATAVPLDIIDANLQHLSVLELSDSPALASNRSVL
SPQTVVELFYQSVARKAIVTQIYSQQQSTALLHWPQMVSSVVTLLAQQLWPNNPGFQFPE
CLMGNCQYTQLQEYVRLIGPWCQVNVGSCRFMLGQCYLANGEGQKALQCFQEAATEVEKE
EFLLRLTGAEEEEVTAASRLQYYNKVLRLLEDVGLPELVIHLATLAITEAVNDPRSQAAL
WTRIFKHHLDLGHNSQAYEALTQNPDSSRQLDCLRQLVVVLCERSQLQDLVQFSYVNLHD
EVVSIIESRARAVDLMSHNYYELLYAFHINRHNYRKAGTVMFEYGMRLGREVRTQLGLQK
QVNCYLASLNCLRLIRPDYAWIVQPSSGAVYERPGASPKRNYDGEFATGPVSGQIDILEL
KDLQKEYTLARSRLNLAQHHPPSAAIAGSASAVEMVSLLVQTGLFDCALSLCQTFKLSLT
PIFEGLAFKCIKLQYGGEESQNEAWNWLAANQLSTIITTKESSATDEAWRLLASYLEKHP
TQNAQHHRCVINKLLSHGVPLPDWMVNTYKGVDAAALLRLYLNYDLLEEAAELVLEYVDA
LLGKGHQYFGIERPLSATASLVWLPYTSIDQLLQALNETQTNASIYNKLQDKLNDYHKLV
DQTTRRRLQAQ
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcttggaaaggagttttatagagatatgtggatttgagagggaaacccta
ccaagattccgggagataactgtaaacctcggtctgaattctcttcctggcggtgtaaaa
tacccggacagcgcaggaggctttcattatgaggagagtggaaaactcctgtccatcact
agcaacagatgcatacactggtccacctctggggacacagttcagctggtggagcagtct
ctggacaccaacctactgaacaatgctgttaaactcaagatcacacattgccacctgctg
cctggaggtgtccacatccaggagaccctcaacaatgtcatcatcctcattgtcaccaat
cagaccgtgcaccggctggtgctgccacaccccacacgcatgtaccgcagcgagctggtg
acagagctccagatgcagtctatcttcacagacgtggggaagctaagtcttcaggatcca
gcccacagcgcggcgatccccagccccgtaggccagacagcaggcccctccgcctcagca
gcctggctcagccaccagggagaggcccactatgccctggcatcacctgctgggggcatc
ctggtcatcacactgcccccacatgacacacagggtagcataaccattctggagctgaag
aggagctctgtaatgcagagactcgctggctggatgccaactgcaatcagaggtgagcag
agtcctggagacttggccctgagtctggcagtaagagaactggaggacgacaccttcata
ttcgctctgtgtcaggaccataaactacgcatgtggtcctatagggaccaggtgtgtctg
atggagactgacatgttggagtacatgccagcgtgccgtggcgtgaagggttccccaggg
cagggccatcggctgcggctagccttctccccctctacggggctgtgtctggccgtatac
ctggctgtaccttccaggggacagttcactgttctgcagctggtggccacggacaacaat
cgctacagcctggaccacatctcctcgctttttgccacacaggagacactggtggacttt
gctctgacctcaacggacatctggggcctgtggcttgacgataccaaccagaccgtggtg
aaatacatcaactttgaacattccacggcaggtcagtggaaccaggtttttgtgcagcct
gcccccgaggaggaggtccacatcggagcagaccaggaccccagggagacctacctggac
atgctgttctcccccctgagattcactgcctctgctatagtcaaagccttacagatttac
aggagaggcacagagcgaatcgccgacctcccctgggagaccctcaagaaagaagtgacg
gtggcggtggagaacgagctgcagagcagtgtgacagagtttgagtttagccaggaggag
tacaggcagctgcaagtggagttctggtctaaattctacgcctgctgtctgcagtaccag
gaggctctggccactccgctcggcctactgctcaacccacacacacacatggtctgtttg
ctgaagaagggctttgtgtcattcctgctgccctgctttgctgtggaccacatgtacctg
tcctttgacgagtacctgttctcagaggaggatacgcctgtcagtgaagacccagaagtt
gctcgtgacgtgatgcagctggtgcagtgtctgaggctggtgagtgacgcggttccgggg
gacatggcctatgagatggagaaggccctggaacatttacagtcacctgagagggctgca
gagatggtgctggagaacctactggccaatgacaatgagaatgtgatcgaggacattcag
aacaagctgcaggacatccgtaacccggtgtcagccatggctgtactgatcagagagatg
gacctggagacggactccgagccaggaggagagggacctctcaccacagcaggcctgtca
gtgcgtattagtctgtcccaactgtatggcagcagtgtggcagtggctgttatctgtcag
gctgtctgccagatggccatgaccagagtcctgttctgtagggacctactcatactgcag
cagctctacctacgcctcggagacaatgtgttcctggctggaggggatcagctgctccag
ctacaacaggacctaatcccccgctcctctcacctgctctcctcctactatctcctcaaa
cacatcagccagagcctggccactgccgtgcccctcgacattatagatgccaacctgcag
cacctttcagtcttagagctgtctgattctccagccctggccagcaacagatctgtgttg
agccctcagacggtggtggagctgttctaccagagcgtagcgcggaaggccatcgtcacc
cagatctactcccagcagcagagcacggctctacttcactggccccaaatggtctccagc
gtggtcaccttgctggctcagcaactttggcctaacaatccaggcttccagttccctgaa
tgtctgatgggcaactgccagtacacacaactgcaggagtatgtgcgtctcattgggccc
tggtgtcaggtgaacgtgggctcctgccgcttcatgctgggccagtgttacctggccaac
ggagagggacagaaggcactgcagtgttttcaggaggcagcgacagaggtggagaaagag
gagtttctgctgagattgacaggagctgaggaggaggaggtcacagccgcctcaagacta
cagtactacaacaaggtgttgcggttactggaggatgttggtctaccagagctggtcatc
catctagccactctggccataacggaggccgtcaacgaccccaggagtcaggctgccctg
tggacccgcatcttcaagcaccacctggacctgggacacaacagccaagcctacgaagcc
ctcacacagaaccctgactccagcaggcagttggactgtctgcgtcagctggtggtggtt
ctttgtgaacgctctcaacttcaggatctggtccagttctcctacgtcaacctgcacgac
gaggtggtcagcatcattgagtccagggccagagcagtggacctgatgtctcacaactac
tacgagctgctctacgccttccacatcaacagacacaactacaggaaagcgggtacggtg
atgtttgagtacggcatgcgtctgggcagggaggtgaggacccagctaggtctccagaaa
caggttaactgttacctggcctccctcaactgtctacgactcatcagacctgactacgcc
tggatcgtacagccgtcctctggcgcggtgtatgagaggcctggcgcgtcaccaaagagg
aactacgatggagagtttgctactggtccagtgagtggtcagatcgacatcctggagctg
aaggaccttcagaaggagtacaccctggcccgtagccgcctcaacctggctcagcaccac
ccgccgtccgctgccatcgcaggcagtgcctctgcagtagagatggtgtccctgctggtt
caaacaggactgtttgactgtgccctctcactatgccagaccttcaaattgtctctcaca
cccatcttcgaggggctcgccttcaagtgtataaagttacagtatggtggagaggagagt
cagaatgaagcctggaactggctggctgccaatcagctgtctaccatcatcacaaccaaa
gagtcaagtgcgacagatgaggcgtggcgcctgctggcctcctacctggagaagcaccct
acacagaatgctcagcaccatcgctgtgtcatcaacaagctgctgtcacacggtgtaccg
ctgccagactggatggtcaacacctacaagggtgtggacgctgcagcattgttacggctc
tacctgaactatgacctgctggaggaagcagctgagctggtattggagtacgtagatgct
ctcctggggaagggacaccagtacttcggcattgagaggcccctctctgctacagcatca
ttggtgtggctcccatacacttccatcgaccagcttcttcaggcgctcaacgagacccag
actaacgccagtatatacaacaaactgcaagacaagctgaatgactaccacaaactggtg
gaccagacaacaaggcgaaggctccaggcccagtag
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integrated database retrieval system
