Oncorhynchus nerka (sockeye salmon): 115109678
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Entry
115109678 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: cytoskeleton-associated protein 5-like
KO
K16803
cytoskeleton-associated protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115109678
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115109678
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115109678
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
115109678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
HEAT_2
TOR1L1_N
HEAT_ECM29
TAN
Spectrin_2
ParcG
Motif
Other DBs
NCBI-GeneID:
115109678
NCBI-ProteinID:
XP_029490751
LinkDB
All DBs
Position
LG25:complement(40202939..40245021)
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AA seq
2032 aa
AA seq
DB search
MGDDSEWMKLPIDQKCEHKVWKARLNGYEEALKLFKRIEDEKSPEWGKYLGLLKKFVTDS
NAVAQLKGLEAALAYVENAHVAGKTSGEVVSGVVSKVFNQPKARAKELGSDICLMYMEIE
RAEVVQDELIKGLDNKNPKIVVTCIETLRKALSEFGSKIITLKPVVKVLPKQFESREKAV
RDEAKLLAVEIYKWIRDALRPPLQGINSVQLKELEEEWVKLPTAAPKQSRFLRSQQALKA
KFEQQQAAGGDEADGDKDDEPAPQVDPYELLEAVEILSKLPKDFYDNIEAKKWQERKEAL
EAVETLAKNPKLENGDFGDLVRALRKVIGKDANVMLVTLAAKCVAGLAAGLRKKFGTYAG
HVVPTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLGVMDNKNPSIKQQASLFL
ARSFRHCTQATLPKSMLKAFCPAFLKQVNDSAPEVRDAAYEALGTAMKVVGEKAVNPFLA
DLDKLKLDKIKESADKVELPGKKGGGGGVGAEKKAPAAKAAPPAVAPARSSGPPKKAPAA
KLGGPPKKGKPASAPSAKGKKCPETKEFVETELSIEVCEERSATVLPASCMQLLDSANWK
ERLASMEEFQKAVEQMDKSEMPCQALVRMLAKKPGWKETNFQVMQMKLHIVGLIAQKGSF
SKTSAFVVLDGLVDKIGDVKCGGKAKEGLTATAEACSLPWTAEQVVSMVFAQKNPKNQAE
TLNWLANAMKEFGFAGINVKGFINNVKTALGATNPAVRTAAITLLGVMYLYMGAPLRMFF
EDEKPALLKQIDDEFEKMQGQSPPTAFRGARKGGAEEDGEEADEQEEDGGGAPDVMDLLP
RTDISDKITQDMVDKVGDKNWKIRKEGLDEVAAVISEAKFIQPSIGELPMALKGRLNDSN
KILVQQTLTILQQIAVAMGPALKQHVKNLGMPIITVLGDGKTNVRAAAMTTLQAWVEQTG
MKDWLEGEDLSEELKRENPFLRQEVLGWLAEKLPAMRTVPSDLMLCVPYLYSCLEDRNGD
VRKKAQDALPIFMMHLGYEKMLKATGKLKPASKEPVSALLEKARAVMPAKLAPPPGKAGA
AKSVSGGAPAAKSASSKAKPKPVIDDYDDDDDDDDEPEPETKTKKVVKPGAAKKGVLGKK
APVTKATAKDEEDRSGVIFILVPNGKEQRIKEEKGLKVLKWNFNTPRDEYVDQLKTQMST
CFARWLQDELFHASDFQRQVKAIGVMGERMEDELEGTVSCLDLILKWFTLRFFETNSTVL
MKVLEYLKLLFPTLSRENYHLNEYEASSFIPYLILKVGESKDVVRKDVRAILTMLCKVYP
ASKVFPFLMDGTKSKNSKQRAECLEELGCLIENYGMNVCQPTPAKSMKEIAVHIGDRDNS
VRNAALNTVLAVYNVCGDQVYKLIGNLSEKEMSMLEERVKRSAKKTPAAAPPSARQAAER
ERPQREHPSNPNATFMRKPAQQPQEDVPNKLNQARAQNAVREHSHPSIPKEFXLDLDMIE
NDHTRVSELPDLVQHKLDELLEPIMMPEPKIRSVSPHFDDLHNSTASTINFVISQVASGD
INTSIQALAQIDEVLRQEDKAEAMSGHIDQFLIATFMQLRLIYNTHMADDRLEKKDIFKL
YSCIIGNMLSLFSMESLAREASMGVLKDLMHGLITLMLDARVEDIEDGQQLIRSVNLLVV
RVLEKSDQTNILSALLVLLQDSLTTSSGSPMFSELVMKCLWRMIRFLPETVNSINLDRIL
LDVHNFMKVFPKEKLKQLKSDVPHRTLKTLLHTLCKLTGAKILDHMSMIENKNDSELEAH
LRRVVKHSGNFSGMKSDRGTEKGQDDRMSKAKVSDILSEIFKKIGSKENTKEGLTELYEY
KQKYSDADLEPFLRNTSQFFQSYVERGLRVIESEREGKGRIQPSSTVIPQHGLDSGSVPL
NGEEMKPAVYYERLKILRQRQGLENNSRQAQLLQQEEGDSGPMRPITSLLSKPSVASSTD
MLQSKLSQLKESRESHFQQEQSHSHSPTRCSSPSANLDDLKKRLERIKSNRQ
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgacagtgagtggatgaagttgcccatcgaccagaagtgtgaacacaaggta
tggaaagccagactaaatggctatgaagaagccctgaagctcttcaagaggatagaggac
gagaagagcccagaatggggcaaatacctgggcctgcttaagaagtttgtgacagactca
aacgcagtggcccagcttaagggccttgaggcagcacttgcctacgtcgagaatgctcat
gtggctggcaaaacatcaggagaggtggtgtcgggagtggtcagtaaagtgttcaaccag
cctaaagccagggccaaagagctgggctcagacatctgcctcatgtacatggagattgag
agggctgaggtggttcaggacgagctcatcaaaggcctcgataacaaaaaccccaagatt
gttgtcacctgtattgaaactttaaggaaagcacttagtgagtttggctccaaaattatt
actctgaagccagtggtgaaagttttgcccaaacagtttgagtcgcgagaaaaggcagtt
cgagatgaggccaaactactagcagtagagatctataaatggatccgggatgctcttcga
cctcctctccagggcatcaactctgttcagttgaaggaactggaggaagagtgggtgaag
ctgccgactgcagcccccaaacagagccgcttcctccgctcacagcaggccctcaaggcc
aagtttgaacagcagcaggcagctggaggagacgaggcagatggagataaggatgatgaa
cctgcacctcaggtagacccttacgagctgctggaagcagtggagatcctctcgaaacta
cctaaagacttctacgacaacattgaggccaaaaaatggcaggagaggaaagaggccctg
gaagcagtggagaccttggctaaaaaccctaaattggagaatggggactttggtgactta
gtcagagcactaagaaaggttattggtaaagatgcaaatgttatgttggtgaccctagct
gccaaatgtgtggctggactagcagctgggcttcggaagaagtttggaacgtacgcagga
catgtggtgccaacaattttagaaaagtttaaagagaagaaaccccaagtggtccaggcc
ttgcaagaggctattgatgcaatcttccttactacaactctccagaatatcagtgaggat
gtgttgggtgtgatggacaacaagaacccttccatcaaacagcaggcctctctgttcctg
gccagaagcttccgccactgcacccaagccacattgccaaagagcatgctcaaagctttc
tgtcctgcatttctcaagcaagtgaatgattcggccccagaggtgagagacgctgcgtat
gaagctttggggacagccatgaaggtggttggggagaaggctgtcaacccattcctggct
gatctggacaaactcaagcttgacaagattaaagaaagtgccgataaagtggagctgcct
ggaaagaaaggtggtggtggtggtgttggggcggagaagaaggcacctgctgcaaaggca
gcaccgcctgctgtggctccagctagatcctctggaccgcccaagaaggccccagcagct
aagttgggtggacctcctaagaaagggaaacctgcctccgctccgagtgcgaaaggaaag
aaatgtcctgaaacaaaggaatttgtagagaccgagctatcaattgaggtgtgtgaggag
aggtccgccacggtgctccctgcctcctgcatgcagctgctggactccgctaactggaag
gagagactggccagcatggaggagtttcagaaggctgtggagcagatggacaagagtgag
atgccttgccaggctctggttaggatgcttgccaagaaaccaggctggaaagagaccaac
ttccaggtgatgcagatgaagcttcacattgtgggtctgatagcccagaagggatcattc
tccaagacgtcagccttcgtggtgttggacggcctggtggataaaataggagatgtgaag
tgtggcggcaaagccaaggagggcctgactgctactgctgaagcctgctccctaccctgg
actgctgaacaggtggtttccatggtttttgcacagaagaatcctaaaaatcaagctgaa
accctcaactggttggctaatgccatgaaggaatttggatttgctggcatcaatgtgaag
ggtttcattaacaacgtcaagacggcgttgggagcgaccaaccctgcggtgcggaccgca
gccatcaccctcctaggagtcatgtacctgtacatgggagctcctctgcgcatgttcttc
gaggatgagaaacctgccctgctgaaacagatagacgatgagtttgaaaagatgcaaggc
cagtctcctccaactgcgttcagaggagccaggaaaggaggagcggaggaggatggagag
gaggcagacgagcaggaggaggatgggggaggagcacctgacgtcatggatctgctacct
agaaccgacatcagtgataagatcacgcaagacatggtggataaggtaggtgacaagaat
tggaagattcgtaaggagggtctggacgaggtggcagcggtcatctctgaggccaagttt
atccagcccagcatcggagagctacccatggcactgaagggacgcctcaacgactccaac
aagatcctggtccagcaaaccctgaccattcttcagcagatcgccgtagcgatgggccca
gctctgaagcaacatgtcaagaacctgggcatgcccatcatcactgtactgggagacggc
aagaccaacgtgcgtgctgctgccatgacaaccctgcaggcctgggtagaacagaccggc
atgaaggactggctggagggagaggacctgtctgaagagctcaagagagagaaccccttc
cttaggcaggaggtgctgggctggctggcagagaagctccccgccatgcgtacggtgccc
tctgacctgatgctgtgtgtgccctacctgtactcctgtctggaggaccgcaacggagat
gtgaggaagaaggcccaggacgccctgcccatctttatgatgcacctgggctacgagaag
atgttgaaggccactggcaaactcaagcccgcctccaaggagcctgtgtctgccctgctg
gagaaggcccgggcagtgatgccagccaagctcgctccacctcctggcaaagctggcgca
gccaagtctgtcagcggcggtgcccctgctgcaaagtcagcttcgtctaaagctaaacct
aaacctgttattgatgactatgatgatgatgatgatgatgacgacgagccagagcccgaa
actaagactaagaaagtggttaagcctggagctgctaaaaagggtgtgcttgggaagaag
gccccggtcactaaggccactgccaaggatgaggaggacaggtctggtgttatctttatt
ctggtacccaacggcaaggaacagaggataaaggaggaaaaagggctgaaggtgttgaaa
tggaatttcaacactccgcgagacgagtatgtggaccagttgaagactcagatgtccacc
tgcttcgccagatggctccaggacgaactcttccacgcttctgacttccaacgccaggtc
aaggctattggggtcatgggagagcgaatggaggatgagcttgagggcacagtcagctgc
ttggacctgatcctgaagtggttcacactgcgtttctttgagaccaacagcactgtgttg
atgaaggttctggagtacctcaagctgctcttccccacgctgagcagagagaactatcac
ctcaacgaatacgaggcttcctccttcatcccctacctcatcctcaaagttggggagtcc
aaggatgtggtgcgtaaagacgtgcgtgccatcctcaccatgctgtgtaaggtctaccct
gcaagcaaagtcttcccgttcctcatggacgggaccaagtccaagaactccaaacaaaga
gctgaatgtcttgaggagctgggctgtctgatagagaactatggaatgaacgtctgtcag
ccaacaccggccaaatccatgaaagagatcgctgttcacatcggagacagggacaattca
gtacgcaacgctgccctcaacacagtgttggctgtgtacaatgtctgtggggaccaagtc
tacaaactcattggcaatctgtccgagaaggagatgagtatgttagaggagagggtcaag
cgctctgctaagaagacccctgcagcagccccaccatccgccagacaggctgcagagagg
gagaggccccagagagagcacccctccaaccccaatgctaccttcatgaggaagcctgct
cagcaacctcaggaggatgtgcccaacaagctcaaccaagcgcgggctcagaacgctgta
cgggaacactcacacccgtccatccccaaggagttcnagctggacctggacatgattgag
aacgaccacacacgggtcagtgagctgcccgacctggtccaacacaaactggacgaactg
ctggagcccatcatgatgccagagcccaagatccgttctgtctcgccccactttgatgat
cttcacaacagcaccgcttccaccatcaactttgtcatctcccaggtggccagtggagac
atcaacaccagcatccaggcgctggcacagattgatgaggtgttgaggcaggaggacaag
gcggaggccatgtcaggtcatatcgaccagttcctcatcgccaccttcatgcagctgcgc
ctcatctacaacacacacatggctgacgaccgcctcgaaaagaaggacatcttcaagctc
tacagctgtatcatcggcaacatgctctcgttgttctctatggagagcctggcgcgagag
gcatctatgggggttctaaaggacctgatgcacggtctgatcaccctgatgctggatgcc
cgggtggaggacatcgaggacggacagcagctcattcgctccgtcaacctgctggtggtc
agagtactggagaagtctgaccagaccaacatcctcagtgctcttctagtactgctacag
gacagccttaccacctcatcagggtctcctatgttctctgaactggtcatgaagtgcctg
tggcgtatgatccggttcctgccggagaccgtcaacagcatcaacctggaccgcatcctg
ttggatgtccacaactttatgaaggtgttccccaaggagaagctgaagcagctgaagtct
gacgtgccccacaggacactcaagacactgctgcacacactgtgtaaactcactggagcc
aagatcctggaccacatgtccatgatagagaacaagaatgattctgagctggaggcccac
ctgagacgagtggtcaaacactctggaaacttctctggcatgaagtctgaccggggcaca
gagaaaggccaggatgacaggatgtcgaaagctaaagtgagcgatatcctctctgagata
ttcaagaagattggctccaaggaaaacacaaaagagggcctgacggagctgtatgagtat
aagcagaagtactccgacgctgacctggagcccttcctgaggaacacgtctcagttcttt
cagagctacgtggagagaggcctccgcgtgatcgagtctgagagagagggcaaaggcagg
atccagccttctagcacagtgattccccaacatggcctagactctggctcagtgcctctg
aacggagaggagatgaaacctgcagtgtactacgagagattgaagattctgagacagaga
caaggactggagaacaactccaggcaggctcagctgttgcagcaggaggagggggacagt
ggaccgatgcgtcccatcacgtcccttctgtccaagccctcggtggcctcctccacagac
atgctccaaagcaaactgtctcagctcaaagagtcccgcgagtcccacttccagcaggag
cagtcccactcccacagccccactcgatgctcgtccccctccgccaacctcgacgacctc
aagaagaggctggaacggataaagagcaaccgccaataa
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integrated database retrieval system
