Oncorhynchus nerka (sockeye salmon): 115109701
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Entry
115109701 CDS
T07952
Name
(RefSeq) glypican-6-like isoform X1
KO
K08112
glypican 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115109701
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
115109701
Proteoglycans [BR:
one00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
115109701
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
Others
115109701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Put_Phosphatase
DUF5856
Fz
Motif
Other DBs
NCBI-GeneID:
115109701
NCBI-ProteinID:
XP_029490809
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Position
LG3:complement(37682920..37793976)
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AA seq
569 aa
AA seq
DB search
MLRYQTVLWIFSLLSVAAGSDFKARNCSGVKEASIAKGFSFENVPLQQMSGDHLRVCPQG
NTCCSSEMEDKFGQQSKLELENLVDETSKELRSTFVSRHKKFDEFFLELLENTEKSLNEM
FVRTYGKPYMQNSEVFQNLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
DDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVANRVSKVSSTPA
CIRALTKMMYCPYCQAMPSVKPCNNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSVQVSYRIFQGCGQPKPSGMGGRSTRGVSDVFNA
RFRPYSPEERPTTAAGTSLDRLRTVWSAMQHSVIDIKEKLKLFKKLWSNLPEDICQPHRV
TAGNATDDDQCWNGHTKGRYFPEVMKDGLTNQVNNPEVGVDITRPDTFIRQQIMALRVMT
NKLKNAYNGNDIYFQDSSDEGSGSGSGSGCTEACVTEFDFASTEAPVVGADRSGSGPVED
SAAATHPAPSAALLASLSFSVLALHRLWR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctgagataccagacggtcctttggattttctcattgctgtctgttgcagctggatcc
gattttaaagcacgtaactgcagtggggttaaagaagcttctattgcaaaaggcttcagc
tttgaaaatgttcctctccaacaaatgtcaggtgaccatctccgggtatgtccccagggc
aatacctgttgcagttcagaaatggaggacaagtttggtcaacaaagcaagctggagtta
gagaacctggttgatgaaactagtaaagaattgcgaagcaccttcgtctccaggcataaa
aagtttgatgagttcttcctggagctgctggagaacacggagaagtccctgaacgagatg
ttcgtacggacctatggcaagccttacatgcagaactcagaagtcttccagaacctgttt
gccgagctgaagcgctactacactgggggcaacgtgaacctggaggagatgctcaacgac
ttctggtcgcggttgctggagcgcatgttcacgctgctcaactcccagtacgtcatcaca
gatgactatctggagtgcatcagcaagtacacagaccagctcaaaccctttggagacgtg
cccaggaagctcaaggctcaggttacaagggccttcattgcagcccgcacattcgtccag
gggctctcggttggtcgagaggtggccaacagggtgtccaaggtgagcagcaccccagcg
tgtatccgagcactgaccaagatgatgtactgcccatactgccaagccatgccctccgtg
aagccctgtaacaactattgtctgaacgtcatgaagggctgtctcgccaaccaggccgat
ctggacccagagtggaaccagtacatcgatgccatgttgctggtggcacagaggctggag
ggacccttcaacatcgagtctgtcatggaacccattgatgtcaagatttcggaggccatc
atgaatatgcaagataacagtgtccaagtctcctacaggatttttcaaggctgcggccaa
ccaaagccctcaggaatgggcggcaggtctacccggggcgtctcggatgtgttcaacgcc
cgcttcaggccctacagcccagaggagcggcccaccactgcagctggcaccagcctggac
agactgaggactgtctggagtgcaatgcaacacagtgtgattgacatcaaggagaaactg
aagctgttcaagaagttgtggtccaacctgcctgaggacatctgccagccacacagggtg
acagcagggaatgccaccgatgacgaccagtgttggaatgggcacaccaagggcaggtat
ttcccagaggttatgaaagacggattgaccaatcaggtgaataacccggaggtgggcgtg
gacatcaccaggcctgacacgttcattcgccagcagatcatggctctgagagtgatgaca
aacaagttaaaaaatgcctacaatggcaatgatatctactttcaagactcaagtgatgag
ggcagtggctcgggcagtggcagcggctgcacggaggcctgcgtcactgagtttgacttt
gccagcaccgaggcaccggtggtgggagcggaccggagcgggagcggcccggtggaggat
tcagcagcagccacacaccctgctccctcagcagccctgctggccagcctgtccttctca
gtcctggcactgcacaggctatggagataa
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