Oncorhynchus nerka (sockeye salmon): 115109716
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Entry
115109716 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00380
Tryptophan metabolism
one00785
Lipoic acid metabolism
one01100
Metabolic pathways
one01210
2-Oxocarboxylic acid metabolism
Module
one_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115109716
00380 Tryptophan metabolism
115109716
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
115109716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115109716
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115109716
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
Motif
Other DBs
NCBI-GeneID:
115109716
NCBI-ProteinID:
XP_029490840
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All DBs
Position
LG25:42646353..42664172
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AA seq
929 aa
AA seq
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MSVLLFLKNLHCVNKVSLSVARPVVGCLYHTKKGVYGYRPQKIQGDPKLQSDHIATLNQD
HGLMRLVEAYRAHGHKAAKINPLLPEDPVEDTVPEINMLTGAVQGPLNTSGLRHFGKAEA
SVEEVVAYLEDAYCGRISIETSQLTSLEERVWFADRFEELKKEKFTAEERKKLAKLMLES
QEFDNFLANKFSTVKRYGGEGAESMMGVFYEMFRLLSHSGVTDIVMGMPHRGRLNLLTGL
LQFPPELMFRKMCGLSEFPADSPSIGDVLSHLTSSVELDFGAAHLLKVTMLPNPSHLEAI
NPVTQGKTRARQQLKKEGDYSPDENAQPGNKVVCLQVHGDASFSGQGIVPETFTISLLPH
FRVGGSIHLIVNNQVGYTTPSARGRSSLYCSDVGKMVGCAVVHVNGDDTEEVVRATHLAV
EYQRRFRKDVILDLLCYRRWGHNELDKPGFTNPAMYKIIRSRKSIPDSYADQLISEGLMT
GEECGAIRTAHYGMLNDKLANMTLYSPPPTRSLLLQGRWGGLEEPQARVTHWDTGVPVPL
LQYVGAKSVEIPEEVQLHSHIGKIHVAGRRAKVENGTNLDWSTAEAMAFGSLLCQGFNIC
ISGQDVGRGTFSQRHAMIVCQDTDDMYIPLNHIDPEQKAFMEVCNSALSEEAVLGFEYGM
AIAQPKLLPIWEAQFGDFFNGAQIIFDTFLSGGEAKWLLQCGMVILLPHGYDGAGPEHSS
CRMERFLQLCDSKEEGVDGDNVNMGVVNPTTPAQYFHLLRRQMIRNFRKPLIVAGPKTLL
RFSGATSSLADMAPGTSFKPVIGDTSVTPASVQQVVLCSGKHYYALLKQREASAATQTTA
LIRLEELCPFPLEALQQELTKYTNAKEFVWSQEEPQNMGPWSFVAPRFEKQLACKLRSVS
RPTLPAPAVGIGTLHHQQNEAILTATFSS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgctactattcttgaaaaacttgcactgcgttaacaaagtttctctgagtgtc
gcgcgcccggtcgtcggttgtctatatcacaccaaaaaaggagtctacggttaccgacca
caaaaaatccagggggacccgaagttgcagagcgaccatatcgctacactcaatcaagat
catggtctcatgcgcctggtggaggcataccgagcacatggacacaaggctgctaaaatt
aaccctctactgccagaggaccctgtggaggacactgtgccagagatcaacatgttgact
ggggctgtacaaggacccctcaacacatctggactgcgtcactttggtaaggctgaggcg
tcagtggaggaggtggttgcctacctggaggatgcctactgtggccgcatttccatagag
accagtcagttgaccagtctggaggaaagggtgtggttcgccgaccgcttcgaggagttg
aagaaggagaaatttacggcggaggaaaggaaaaagttggccaaactcatgctggagtcg
caggagtttgataatttcctggcaaacaagttttccacggtgaagcgttacggtggtgag
ggagcagagagcatgatgggggtgttctatgagatgttccgcctgttgtcccacagtggg
gtgacggacatcgtcatggggatgcctcatcgcgggcgactcaacctcctcacggggctg
ctgcagttcccaccagagctgatgttccgtaagatgtgtggcctcagtgagttcccagcg
gactctccctccatcggtgacgtcctctcccaccttacctcctctgtagagctggatttc
ggtgctgcccacctcctcaaagtgaccatgctgcccaacccctcccacctggaggccatc
aacccagtcacccaggggaagaccagggcccggcagcagctcaaaaaggagggagactac
tcaccagacgagaacgcacagcctgggaataaagtcgtatgtctccaggtccatggggat
gcctcattctctggtcaagggattgttccagagacattcaccatttcactactcccccac
ttcagagtcggtgggagcatccacctcattgtaaacaaccaagtgggttatacaactcca
tctgcgagagggagatcatctttatactgcagtgatgttggtaagatggtgggctgtgct
gtggtccatgtgaatggtgatgatacggaggaggtggtgcgtgccacacatttggcggta
gagtatcagagacgcttcaggaaggatgtcatcctggacctgctctgctacagacggtgg
ggacacaacgagctagacaaacctggtttcactaaccctgccatgtacaagattatccgc
tccaggaagagcatcccagattcctacgctgaccagctgatctcagagggcctgatgaca
ggggaggagtgtggtgccatcaggacagcccactacggcatgctgaacgacaagctggcc
aacatgaccttatacagcccaccacccaccaggtctttgttgttacagggtcgctgggga
ggcctggaggagccccaggccagagtcacccactgggacacgggggtgcctgtccccctg
ctgcagtatgtaggggctaagtctgtggagatacccgaagaggtccagctacacagccac
attgggaagattcatgtggcgggtcgccgtgcgaaggtggagaatggaactaatctggat
tggtccactgctgaggccatggcgtttggctctctgctctgccaagggttcaacatttgt
atcagtggacaggatgttggtaggggcaccttcagtcagagacatgccatgatagtttgt
caagacacagatgacatgtacatccccctcaatcacatagaccctgaacagaaagcattc
atggaggtgtgcaacagtgccctgtctgaggaggccgtgttgggctttgagtatggcatg
gccatcgcccagcctaaactactgcctatctgggaggctcagtttggagacttcttcaac
ggagctcaaatcatattcgacaccttcctctctggaggcgaggcgaagtggctgctgcag
tgtgggatggtgatcctgcttccccatggttacgacggagcaggacctgaacactcctcc
tgccgcatggagaggttcctacagctgtgtgacagtaaggaggagggggtggatggtgac
aatgtcaacatgggcgtggtcaaccctacgactccagcacagtacttccacctgctgaga
cgacagatgatacgcaacttccgcaagccgctcatcgttgctgggcccaagactttgctc
cgtttctctggagcaacatccagtctggctgacatggctcctggaacctctttcaaacct
gtgattggtgacacctcagtcacaccagccagtgtccagcaggtggtgctgtgttcaggg
aagcactactatgccctgttgaagcagagggaggcatccgcagccactcagaccacagca
ctgatcagactggaggagctgtgtcccttccctctggaagccctgcagcaggagctcaca
aagtacaccaatgccaaagagttcgtctggagccaggaggagccccagaacatgggcccc
tggtccttcgtggcccctaggtttgagaagcagctggcctgcaagctccggtcggtgagt
cggcctactctgcccgccccggctgtgggcatcggaacgctccaccaccagcagaacgag
gccatcctcactgccaccttctcctcttga
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