Oncorhynchus nerka (sockeye salmon): 115109758
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Entry
115109758 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115109758
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115109758
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115109758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
Pox_A_type_inc
Endonuclease_7
zf-RING_2
PRP21_like_P
zf-HC5HC2H
NorB_cytochrome_c-like
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
115109758
NCBI-ProteinID:
XP_029490912
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All DBs
Position
LG25:complement(3765851..3817556)
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AA seq
565 aa
AA seq
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MDLHWPTFKMDSSSYLPGLLASPALMVLAKTGRDASVPCQASVPCQAPRSFRAPIFEKDL
PFPSGSYTFASMYNRQGPISGHGSFPARDFPASLLHLHPQFQFHPNNLDCPSLGMLNHIG
VGAFRPFSSPPEERETRGYQSAFTPAKRLKGCYTDSEGKEYDFGGGCFLSGSPGSLKAAE
DSGRKLFTVSGLLSDREASSSPEDRKEHLCPVCHAVLPPGELQEHMEQEMGRLAQLQIST
NSVQRNHPLGATKTLSLSLHIKCEGGSPTSLSCPPEEPHTDRYQTFLRVRTNRHARLNVD
DWCYAKPAPLSPHNRSHLTPDCKRIGSVCSCGEGLLLQVTVPQVTDILLDLGGEEWGERR
RIRMTSILGGCEGSVFVSSSTSKESRGDRAADLDVDGDDTLQYGRVQCMEADIPCSGKDP
GVVEEREALRGAVLNGGTLSNRVTLEHSKWTNEGSPSTSNGESNKLDNSIASLHRTCKHS
DIDMVSELTTLDSLRSRIRDLEKQLSRGDRHSCLICRDTYTTPLTSIQCWHAHCEECWLR
TLGAKKLCPQCNTITSPGDLRQVFL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacctccactggcccaccttcaagatggacagctcctcctacctgcccggtctcctg
gcgtccccagccctgatggtgctggccaagacaggccgtgatgcctccgtcccctgccag
gcctccgtcccctgccaggccccgaggtccttcagggccccaatctttgagaaggacctc
cccttcccctccggctcctacacatttgcctccatgtacaaccgtcaggggcctatctcc
ggccacggctccttccctgccagagacttccctgcctccctgctccacctccatcctcag
ttccagtttcaccccaacaacctggactgcccttccctggggatgctcaaccacattggg
gtaggggccttccgacccttctcctccccgcctgaagagagggagaccaggggttatcag
tcagccttcacccctgctaagagactcaagggctgctacacagattctgaggggaaggag
tatgattttggaggagggtgtttcctctctggctcaccgggatcactcaaggccgccgag
gattctgggaggaagttgtttacggtgtctgggctgctgtcggacagagaggcctcgtct
agtcctgaggaccgtaaggaacacttgtgtccagtgtgccatgctgtgttaccaccaggt
gagctacaggagcacatggagcaggagatgggcagactggcacagttacaaatcagtact
aattcagtgcagaggaaccatccattaggagctactaagaccctctcactatctctgcac
attaaatgtgagggtgggtcccccacctctctctcctgccctcctgaagagccccacaca
gacagataccagacgtttctgcgtgtgaggacaaacagacatgcaagactgaatgtcgat
gattggtgctacgccaaacccgctcctttaagtccccacaacagaagtcatctaacccca
gactgcaaaagaattggctcagtgtgttcatgtggagagggcctgcttttacaggttacc
gtacctcaggttaccgacattttgttggacctggggggggaggagtggggtgagcggagg
agaatacggatgacatccatactgggagggtgtgaagggtcggtgtttgtgagcagcagc
acgtctaaggaaagccgtggtgaccgtgccgctgacctggacgtggatggagatgacact
ctgcagtatggaagagtacaatgtatggaggcagacatcccctgttcagggaaggatcct
ggggtggtggaggagagggaagcactgaggggggcggttttaaatggtggtacactgtcc
aacagagtaactctggaacattccaaatggacaaatgagggaagtccatcaactagcaac
ggagagagcaacaaactggataacagcatagcctccctacacaggacctgtaaacatagt
gacattgatatggtctctgagctgacgacgttggattcactaagaagtcgtatacgggac
ctagagaagcagctgtccagaggagacagacacagctgtcttatctgtagggacacttac
acaacacccctcacctccatccagtgctggcatgcccactgtgaggagtgttggctccgc
actctgggggctaagaagctgtgtccacaatgtaacaccatcacttctcctggggacctg
agacaggtatttttgtga
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