Oncorhynchus nerka (sockeye salmon): 115109775
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Entry
115109775 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115109775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115109775
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115109775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
115109775
NCBI-ProteinID:
XP_029490923
LinkDB
All DBs
Position
LG25:10142930..10251908
Genome browser
AA seq
3023 aa
AA seq
DB search
MGAGKLARVLLGWAAVCLASVHTAYGQAGDGGYQASRFTGKVDEREVQRVRRRGQETLRG
PNVCGSRFHSYCCPGWKTLPAGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGAGA
GVQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHPCRRG
FIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDIDECST
IPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVGGVGPRGRSSGPPPTWAPRRRVAAG
RRARRRRGPRGSVGRAGRRWPRRRRGPPALRVGRAGAVGPPSGFGRAGGVGPRCAAGRSG
AVCRSFGVSLGRRSWAESAFLFRASPRARFFGLGRAGPSCGPCFRVGERRCAGDLQGQYT
KMQCCCDIGPCWASSGQSLRCVLSGDPALSILFLIDEYRRLCIEGVPHGTGNGGFPHGVF
PNGGGYPNGGGNGHGYSYGYKLNPNGPNGNGHHGNGGGIGGGGIGGGGQGAGGNGFGGNG
GGRNIVPVSVNETVDVCKHFTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVS
NPCVNGDCVNTPGSYHCKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTAGSFQCI
CNAGFELTPDGKNCIDHDECATTNMCLNGMCINEDGSFKCICKPGFALAPNGRYCTDIDE
CQTPGICMNGRCINSEGSFHCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPG
AVTKSECCCASPEHGFGEPCQPCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQN
GMCENLRGSYRCICNIGYESDSSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGF
VFKPDSETCEDINECESSPCVNGVCRNIAGSFNCECSHGSKLDSTNTICVDPXRTCWLNX
PDGPCEVNINGATLKSECCSTLGAACGSPCERCEIDTACSRGFARMKGVNCEDINECEVF
PGVCTNGRCVNTQGSFRCECGEALTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRV
DMCCCSVGAAWGIDCEECPKAGTPEYKAICPRGPGFANRGDILTGRSFYKDVNECKVFNG
LCSHGTCRNTIGSFKCRCSSGFALNMEERNCTDIDECHISPDLCGHGTCVNTPGSFECEC
FEGYESGFMMMKNCMDFDECERNPLLCRGGTCLNTEGSYECECPPGHQLSPDGSSCEDVN
ECQLSDNLCKNGHCVNMVGNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEG
SYECSCSEGYALMPDLRTCADIDECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRT
CIGINQGTDCDVXTRVQTQGERNXHLMYFPLLISFLFLPDIDECEIGAHNCDMHAACLNV
PGSFKCRCRDGWVGDGIKCVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSC
SDMDECADNVNLCENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQ
NLPGMFRCVCDDGYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPT
GVGCVDTRVGNCFLDTLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPPINST
EYKTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEET
RICEDIDECTAHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDT
CENELSFNMTKKMCCCAYNVGKAWNKPCEACPTPATSEYQLLCGNQAPGFIIDIHTGKPI
DIDECREIPGICANGVCINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANC
INIPGSYRCECSPGFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATA
DQTMCMDIDECDRQPCGNGTCKNTVGSYNCLCFSGFELTHNNDCMDIDECSALVGQVCRN
GQCINGLGSFQCLCQEGYELTLDGKNCVDINECVSLPGTCSPGICQNLDGSFRCICPAGY
EVQNDQCIDINECEVEPNICQFGTCTNTPGSFQCICQNGFVLSDNGRRCFDTRESFCFTR
FESGKCSVPKAFNTTKAKCCCSKMPGEGWGDPCELCPRESEAAFDSLCPYGHGALPGRGD
AREDMNECLDNPGVCQNGVCINTDGSFRCECPFGYNLDYTGINCVDTDECSIGNPCGNGT
CTNVLGGFECSCHEGFEPGPMMTCEEIIQRVFMDEPPAVCAFRCGNTFGSYECRVPRGYV
LRVSPSLSPDQDECSEGLDDCESKDMSCKNLIGTFMCICPPGLQRRPDGEGCMDLNECRA
KPGICKNGRCENTVGSYRCVCNEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNS
VTKSECCCNLGRGWGPQCELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVLPDLCKNGQ
CINTIGSFRCHCNVGYTTDFTGTSCIDMDECSASPRPCNFLCKNTEGSYLCSCPRGYTLQ
PDGKTCKDLDECSTKQHNCQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGS
RASCVNTPGSFNCDCGKGFSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYV
QHYQWNQCVDENECSGVSVCGSASCYNTLGSFKCVCPSGFDFELGGGGCQDVNECSMGSN
PCSFGCSNTDGGYLCGCPGGYYRAGQGHCISGQGFQDQFSSEGDDEDSLSPEACYECKIN
GDVGKKGRHRRHSAGDNDLKEVSMASLDTQESIPMNLSLASLHNKEPLLELLPALEPLEH
HVRYVITHGNQDQHFRLLERHNGKSVLRLGRKPPPPGSYRLEIASLPLFGPRRLRQLEEE
HDSDYLLGEIGDALRIKLHIHLN
NT seq
9072 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccgggtgctgttgggatgggcggccgtgtgcttggcctcg
gtccacactgcgtacggccaggcgggagacggagggtaccaagccagccgcttcacagga
aaggtggacgagagggaggtgcagagggttcgcaggagaggacaggagacactcagaggg
cccaatgtgtgtggctctcgcttccactcctactgttgccctggctggaagactctgcct
gcagggaaccagtgtatcgtcccaatctgccgtaactcgtgtggtgatggcttctgctcc
agacccaacatgtgcacttgcggcagcggacagctctcccccagctgtggggccggtgcc
ggagtgcagagctgtaacgtcaggtgtatgaacggaggcagttgccaggaagactcctgc
tcctgtcagaagggttacaccggcaatcactgtggacagcctgtgtgtgagaatggttgc
cagaacggagggcgctgtattgggcccaacagatgtgcctgtgtctacggcttcactggc
ccgcagtgcgagagagactacaggaccgggccctgctttacgcaggtcaacaaccagatg
tgccagggccagctgagtggcattgtgtgcaccaagaccctgtgctgtgccaccattgga
cgggcatggggacacccctgtgagatgtgccctgcacagcctcacccctgtcgccgaggc
ttcatccccaacatccgcagtggagcgtgccaggatgtggatgagtgtcaggccatccct
gggctgtgtgcaggaggtaactgtatcaacacagttggctcctatgagtgtaaatgtccc
gcgggccatcgccagagtgacaccagccacaagtgtgaagatattgacgagtgcagcact
atcccaggtgtgtgtgacggaggtgaatgcaccaacacagccggtagctacgtctgcacc
tgtccccgtggttacatcacaagcactgacggtgccagatgtgtaggaggcgtgggcccg
cgcgggcggtcctcgggcccgccgccgacgtgggccccgcgccggcgcgtggccgcgggg
cgccgcgcgcgccggcgccgtgggccccgcggcagcgtgggccgcgcgggccgccgctgg
ccccgccggcggcgtgggccccccgccctgcgcgtgggccgcgcgggcgccgtgggcccg
ccgtcgggctttggccgcgcaggcggcgtggggccgcgctgcgccgcgggccgcagcggc
gccgtttgccgctccttcggcgtgtccctaggccggcgctcgtgggccgagtctgcattc
ttgttccgcgcttcgcctcgggcccgcttcttcggcttgggccgcgctggaccctcgtgt
gggccgtgtttccgcgttggcgaacggcgctgtgcaggtgacctgcagggccagtatacc
aagatgcagtgctgctgtgacatcgggccgtgctgggcttcttctggacagtccctgcga
tgtgtcctgtcaggggatcccgccctttctatcctcttcctcatagatgagtacagaagg
ctgtgcatcgagggggtgccccatggaacaggtaacggaggtttcccccacggagtcttc
cccaatgggggcggctaccccaacggcggcggcaacggtcacggttacagctacggctac
aaactcaaccccaacgggcctaacggaaatggtcaccatggcaacggaggaggaatcgga
ggaggaggaatcggaggagggggacagggagcaggaggcaatggttttggaggaaacggc
ggcgggcgtaatatcgtccctgtgtcagtcaatgagaccgttgacgtttgtaaacatttc
accaacctgtgtttgaacggccgctgtatccccaccccgaccagctaccgctgtgaatgt
aacatgggctacaggcaggacgtacgcggggagtgtattgatgtggatgagtgcgtcagc
aacccttgtgtcaacggagactgtgtcaacacacctggatcgtaccactgcaagtgtcac
gaaggctaccagggcacccccaccaaacaggcctgcattgatattgacgagtgcatcgtg
aacggagtgatgtgtcgtaacggacgttgtgtcaacactgccggaagcttccagtgcatc
tgcaacgctggctttgagctcactcctgatgggaagaactgcatagatcatgatgagtgt
gccaccaccaacatgtgtctcaatggaatgtgtatcaacgaggacggtagcttcaagtgt
atctgcaaacctggcttcgccctggcacctaacggacgttactgcacagacattgatgag
tgccagacaccaggcatctgtatgaacggacgctgtatcaactctgagggctctttccac
tgtgagtgcccaccgggcctggccatcgacgtggacgggagagtgtgtgtggacacacac
atgcgcaccacctgctacggtgccatcaagatgggcacgtgctcacgtcccttccctggc
gccgtcactaagtctgagtgctgctgtgccagtcctgaacacggcttcggagagccctgc
caaccctgccctgcccgcaactcagctgagttccaggccgtgtgcagcagtgggattggc
atcaccgctgacggcagagacatcaacgagtgtgccctggaccctgacatctgtcagaac
ggcatgtgtgagaacctgagagggagctaccgttgcatctgtaacatcggctacgagtcc
gactccagcggcaagaactgcgtggacatcaatgagtgcctagtgaaccgtctgctgtgt
gacaacggcctgtgtagaaacacccccggcagctacacctgctcctgtcccaaaggcttc
gtcttcaaacctgactctgagacctgcgaagatatcaacgagtgtgagtccagcccgtgt
gtcaacggagtctgccgcaacatcgccgggtccttcaactgcgagtgttcccacggcagc
aagctggactccaccaacaccatctgcgtggacccatgaaggacgtgctggctgaacnac
ccagatgggccctgtgaggtcaacatcaacggtgccacgctcaagtccgagtgctgctct
acactgggagctgcctgtggcagtccctgtgaacgctgcgagatcgacactgcctgctct
agagggttcgctcgtatgaaaggagtcaactgtgaagacatcaatgagtgtgaggtgttc
ccgggggtgtgtaccaacgggcgctgtgtcaacacccagggctccttccgctgtgagtgt
ggcgaggcgctcactctggacgggagtggacgcacatgcgtggacgtgcgcagtgagcag
tgctacatgaagtggcacgaggatgagtgtggcgagccgctgcccggtcgctaccgcgtg
gacatgtgctgctgctccgtgggcgcggcctggggcatcgactgtgaggagtgtcccaag
gcgggaaccccggagtacaaggccatctgccccagaggaccaggctttgccaaccgagga
gacatcctgactggcagatccttctacaaagatgtaaatgagtgtaaggtgttcaacggc
ctgtgctcccacggaacctgtcgcaacaccatcggcagcttcaagtgtcgctgcagcagt
ggcttcgccctcaacatggaggagaggaactgcacagatattgatgaatgtcatatctct
ccggacctgtgtggccacggcacctgcgtgaacacccctggcagctttgagtgtgaatgc
ttcgagggctatgaaagtggcttcatgatgatgaagaactgcatggattttgatgagtgt
gagcggaaccctctgctgtgtagaggaggcacctgtctgaacacagaggggagttatgag
tgtgaatgtccccccggacaccagcttagtcccgatggttcctcctgcgaagatgtgaac
gagtgccagctgagtgacaacctgtgtaagaacggccactgtgtcaacatggtggggaac
taccagtgctcctgtgacacgggctaccaggttacaccagacagacagggctgtgtggat
attgatgagtgtaccattatgaacggaggctgtgacacacactgtaccaactcagagggc
agctacgagtgcagctgtagtgagggatacgctctcatgcctgacctcaggacctgcgct
gatatagatgagtgtgaggacagccctgatatctgtgatggaggccagtgcaccaacgtg
cctggagagtaccgctgtctctgctatgacggattcatggcctccatggacatgaggacc
tgcatcggtataaaccagggtacagactgtgatgtataaaccagggtacaaacacaagga
gagaggaactaacatttgatgtattttcctctcttgatctctttcttatttcttccagat
attgatgagtgtgagattggggctcacaactgtgacatgcatgctgcctgtctcaacgtt
cccgggagcttcaagtgtcgttgtcgtgatggctgggtgggagacggcatcaagtgtgta
gacgtggatgagtgttccactgaggagcacaactgcaatctcaatgcagactgtgtcaac
acccccggatcctaccgctgtgcctgcaaggagggcttcaacggggacggcttctcctgt
tctgatatggatgagtgtgctgacaacgtgaacctgtgtgagaatggccagtgtctgaac
gctccggggggctaccgctgtgaatgtgagatgggcttcacccccaccgaggacagcaag
gcctgccaggatattgacgaatgtaacttccagaacatctgtgtgtttggaacgtgtcag
aatctaccggggatgttccggtgtgtgtgtgacgacgggtacgagctggaccgcagcgga
ggaaactgcactgacattaacgagtgtgcggaccctgtgaactgcatcaatggcttgtgt
gtgaacactcccggaagctacctgtgtaactgccctccggacttcgagctcaaccctact
ggagtgggctgtgtggacacgcgagtgggcaactgtttcctggatacgttggctcgcggc
gacgggggcatctcctgcagcgctgagatcggcgtgggcgtcacccgcgcctcctgctgc
tgctccctagggggagcctggggaaacccctgtgaactctgccccccaattaactccacc
gagtacaagacactgtgtcctggaggagagggcttcagacccaaccccatcactgtcatc
ctggaagacattgatgagtgtcaggagctgccaggcctgtgccagggtggtaactgtgtc
aacaccttcggcagcttccagtgcgagtgccctgcaggctactacctcaatgaggagaca
cgcatctgcgaggatattgatgagtgcacagcccacattggaatctgtggccctggtacc
tgctacaacaccttggggaactatacctgcgtgtgtcctcctgagtacatgcaggtcaac
ggaggaaacaactgcatggatatgaggaagagtgtgtgttaccgcaactttaacgacacg
tgtgagaacgagctgtcgttcaacatgaccaagaagatgtgctgctgtgcctacaacgtt
ggcaaggcctggaacaagccctgtgaagcctgccctacccctgccacctcggagtaccag
ttactgtgtgggaaccaggctcctgggttcatcatagatatccacacaggcaaacccatc
gatattgatgagtgtcgagagatcccggggatatgtgccaacggagtgtgtatcaaccag
ataggaagcttccgctgtgaatgtcccatgggtttcagctacaacaatatactgctcatc
tgtgaagatattgacgagtgtaacagtggagacaacctgtgccaacgcaacgccaactgt
atcaacatcccagggagctaccgctgcgagtgctcgccaggcttcaagctgtcccccagc
ggggcctgcgtggaccgtaacgagtgccaggagatccctaacgtgtgtagccacggagag
tgtatcgacacccagggcagctaccgctgtctctgccacaacggcttcaaggccaccgcc
gaccagaccatgtgcatggatatcgatgagtgtgacagacagccgtgtgggaacggaacc
tgtaagaacacagtgggctcctacaactgtctctgcttctctggcttcgagctcacgcac
aacaatgactgcatggacattgatgagtgcagtgcgttggtgggtcaggtgtgtaggaat
ggccagtgtatcaacggcctgggctccttccagtgtctctgtcaggaaggctacgaactc
accctagacggaaagaactgtgttgatatcaatgaatgtgtgagtcttcctgggacctgc
tctcctggaatctgtcagaacctggatggatccttccgctgtatctgcccagctggatac
gaggtccagaacgatcagtgtatagatatcaacgagtgtgaggtggagcccaatatctgc
cagtttggcacgtgcaccaacaccccaggaagcttccagtgtatctgccagaatggcttc
gttctgtctgacaatggacgccgctgctttgatactagagagagcttctgcttcacccgc
tttgagtctggcaagtgttctgtacctaaagccttcaacaccaccaaggccaagtgctgc
tgcagcaagatgccaggcgagggctggggagacccctgcgagctgtgcccacgcgagagc
gaggcagcctttgacagcctgtgtccctacggccatggagccttgcccggacgaggggac
gcccgtgaggatatgaatgagtgtctggacaacccaggcgtctgtcagaacggtgtctgt
atcaacacggatggatcgttccgctgcgagtgtcccttcgggtacaacctggactatact
gggatcaactgtgttgacactgatgagtgctctatagggaacccctgtggtaacgggacc
tgtactaacgtgttgggaggcttcgagtgctcctgtcatgaaggcttcgaacccggacca
atgatgacctgtgaagagataattcaacgagtgtttatggatgaaccccctgctgtttgt
gccttccgctgtggcaatacttttggttcgtacgagtgcagggtccctcggggctacgtg
ctgcgagtctctccatctctctctccagaccaggatgagtgttcagaggggctggatgac
tgtgagtccaaggacatgtcctgtaagaacctgattggcacctttatgtgtatctgcccc
cctggcctgcagcggagacctgacggagagggctgcatggacctgaatgagtgtcgtgca
aagcctggcatctgtaagaacgggcgctgtgagaacacagtgggaagctaccgctgtgtg
tgcaacgagggcttccagcccagctccaccggaacggactgtatcgataaccgacagggc
ttctgtttcaccgaggtgctccagactatgtgtcagcagggctccaccaatagaaacagt
gtcaccaaatctgagtgctgctgcaacctcggacgtggctggggaccccagtgtgagctc
tgccctctgcctggcacagtgcagtacaagaggatgtgcccactgggacccgggtacacc
accgacggcagagacatcaatgagtgcacggtgttgccagacctgtgtaagaacggccag
tgcatcaacaccatcggatcgttccgctgccactgcaacgtgggttataccaccgacttc
accggcacctcctgcattgatatggatgagtgttccgcatctcccaggccctgtaacttc
ctgtgtaagaacacagagggcagctacttgtgctcctgccccagaggatacactctgcag
cctgacggaaagacctgcaaagatctggatgagtgttccaccaagcagcacaactgtcag
ttcctgtgtgtcaacaccatcggagggtttacatgcaagtgtcctgcaggtttcacccag
caccagaccgcctgcattgacaacaatgagtgtaatgggcagaacagtgtgtgtggctcc
agagcctcctgtgtcaacactcccggcagcttcaactgtgactgtgggaaaggcttttct
ctggacaccactggcctggagtgtgaagatgtggatgagtgtggtagtaaccatcgctgt
cagcatggctgtcagaacatgatgggaggtttccgctgtggctgtcctcagggctatgtg
caacactaccagtggaaccagtgtgtggatgagaacgagtgttcgggtgtgtctgtgtgt
ggctcggcctcctgctacaacaccctgggcagctttaagtgtgtgtgtccatccggtttt
gactttgagctgggtgggggtgggtgccaggatgtcaatgagtgttccatgggcagtaac
ccctgcagcttcggctgctccaacacagatgggggatatctgtgtggctgtcccggaggt
tactacagggctggacagggtcattgtatttcaggtcagggcttccaggaccagtttagc
tcagagggagatgatgaggacagtctgtctccagaggcctgctacgaatgtaagatcaac
ggagacgtcggcaagaagggccgacacagacgtcactctgctggagacaacgacctcaag
gaggtaagcatggccagcctagacacccaggagtccatccccatgaacctgagcctggcc
tcgctgcacaacaaggagcccctgctggagctgctgccggccctggagcccctggagcac
catgtgcgctacgtcatcacccacggcaaccaggaccagcacttccgcctgctggaacgc
cacaatgggaagagcgtgctgaggttgggcaggaagccacctccccctggctcctaccgc
ctggagatcgctagtctgcccctgttcgggccgcggcgcctccgacagctggaggaggaa
catgacagcgactacctgctgggagagataggagacgccctgcgcatcaagctgcacatc
cacctgaactga
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integrated database retrieval system
